DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment WASp and was

DIOPT Version :9

Sequence 1:NP_001263045.1 Gene:WASp / 43402 FlyBaseID:FBgn0024273 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001107675.1 Gene:was / 496673 XenbaseID:XB-GENE-5759991 Length:476 Species:Xenopus tropicalis


Alignment Length:567 Identity:194/567 - (34%)
Similarity:265/567 - (46%) Gaps:139/567 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SQDGPRAKV----NAASTLLTQEENEAVFKLLGKKCQTLNTAVVQIYKTEGSAHAHWKKRHTGVV 67
            |:.||:|.|    |.:|:||..:||:.||:|||:||.||.|.|||:...:|.  ..|.|:..||:
 Frog     2 SRGGPKAAVRQQDNVSSSLLLPQENQKVFQLLGRKCTTLATTVVQLLVAQGG--DRWAKQFLGVL 64

  Fly    68 CFVKDSAIRSYFMRAYCLIKNELIWEHEIYDGMEVVKSRPFLLTFEGSDGHVGLNFVSEEECDSF 132
            |.|||:..|||:.:.:.|.:.:.:||.|:|:.:..:.:||:..||...:...||||..|.|...|
 Frog    65 CLVKDNPRRSYYFQLFDLQEEKAVWEQELYEQLRYLPARPYFHTFCSDECQTGLNFADEAEAADF 129

  Fly   133 FRIVDATIETRNRKRQEKRNRQKSQQAP---------NAPLPQVQREPARPPPMQGGLSSTDGVQ 188
                ...:|.:.:|:|.:::|:::...|         :.|||    .|..|.|...|.||     
 Frog   130 ----QVVVEEKLKKKQHRQDRRQNLPPPPPVSDDRRTSLPLP----PPPGPGPFPNGPSS----- 181

  Fly   189 LRNNKINSVTLTPAP-APAQSKNF-----------------LSSSFGLGNNAKDKKRKVTKADIS 235
                        |.| ||:||.|.                 ||:....|.|.|.|| |.:||||.
 Frog   182 ------------PQPLAPSQSLNMPAVSIPNPDITSARYRALSAPADKGKNKKGKK-KFSKADIG 233

  Fly   236 RPTNFVHLSHVGWDAQKGFDLAGNENDEVLNEFFVKAGVSEVELKDRDTRAFIYDFIQSNNVLAS 300
            .|:.|.|:||||||...|||:  |:.|..:...|.:||:|:.:|||.:|...|||||:....:.:
 Frog   234 APSGFKHVSHVGWDPNSGFDV--NQLDPDIRNLFSRAGISDAQLKDAETSKLIYDFIEQQGGVEA 296

  Fly   301 VKQYSVESPTETAAPMPPPVPTRHPSNGNQRTAPPLP-PAR-----QPPPAVPVTVPGAARAPPP 359
            ||......  |||.|.|||          .|.|||.| |:|     .|||.|     ..:.||||
 Frog   297 VKNEMRRG--ETAPPPPPP----------SRNAPPAPTPSRGRTGPLPPPPV-----RGSSAPPP 344

  Fly   360 PNRPPPISTAPPPPPVSAPVVAPPPPPPPPPAAVPPPP-----PPPMPVGEIPVITTTHAPTQAA 419
               |||..:.||.||.:|....|||||||||:...|||     |||.|    ||..|...|    
 Frog   345 ---PPPSRSTPPIPPPTARSGGPPPPPPPPPSIPAPPPTSGPAPPPPP----PVSGTQSIP---- 398

  Fly   420 RPAAPAAPDPRNALMDAIRKGTQLKKVDTTALSTGSGDSRSDLMKDIRQGTVLKPAKERELGSQR 484
               :|.....|.||:|.||:||:|.|:..:|                      :|....:..|  
 Frog   399 ---SPTPSGGRGALLDQIRQGTKLNKLTVSA----------------------EPPPSPQPSS-- 436

  Fly   485 NSDSGAGTDALADALRRALAARGNAIHS---DEDETESSDNE-GEWD 527
                    :.|..||...:..|..||||   |:||..:.|:| .|||
 Frog   437 --------EGLVGALMHVMQKRSKAIHSSDDDDDEDGADDDEDDEWD 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WASpNP_001263045.1 WH1 31..140 CDD:144235 40/108 (37%)
PBD 233..291 CDD:279166 26/57 (46%)
WH2 <433..453 CDD:280384 9/19 (47%)
wasNP_001107675.1 EVH1_WASP-like 39..137 CDD:269916 35/103 (34%)
PBD 231..286 CDD:334253 25/56 (45%)
WH2 405..421 CDD:128542 9/15 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9778
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 1 1.000 - - oto102574
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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