DRSC/TRiP Functional Genomics Resources

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Protein Alignment WASp and viro-2

DIOPT Version :9

Sequence 1:NP_001263045.1 Gene:WASp / 43402 FlyBaseID:FBgn0024273 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_741212.2 Gene:viro-2 / 3565684 WormBaseID:WBGene00015107 Length:616 Species:Caenorhabditis elegans


Alignment Length:692 Identity:153/692 - (22%)
Similarity:229/692 - (33%) Gaps:268/692 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 STLLTQEENEAVFKLLGKKCQTLNTAVVQIYKTEGSAHAHWKKRHTG--VVCFVKDSAIRSYFMR 81
            |..|...|.|:|.:.:....:.|::.:.|....|   :|.|:|...|  |..|:|:|..|.|   
 Worm     7 SDFLEINEKESVLRGISASDKILSSGICQFLVAE---NAQWRKPDEGAAVALFLKNSTERYY--- 65

  Fly    82 AYCLIKNELI---------WEHEI-YDGM------EVVKSRPFLLTFEGSDGHVGLNFVSEEECD 130
                   .:|         ||..: :|.:      |.::....||.||....::||||...:||:
 Worm    66 -------RIIVMEPSADPDWEPTVQFDFLIRDKKFETMQEHARLLVFEAESRYIGLNFYDSKECE 123

  Fly   131 SFFRIVDATIETRNRKRQEKRNRQKSQQAPNAPLPQVQREPARPPPMQGGLSSTDGVQLRNNKIN 195
            :|...|        .||| .|:..|::|                |.::|                
 Worm   124 NFHNSV--------CKRQ-TRSTDKAKQ----------------PALEG---------------- 147

  Fly   196 SVTLTPAPAPAQSKNFLSSSFGLGNNAKDKKRKVTKADISRPTNFVHLSHVG-WDAQKG------ 253
                       :.|..:|....|..:..:.|.:|   :|..||:|.|:..|. .|.|:.      
 Worm   148 -----------KKKKKISFFHNLFKSHSESKNQV---EIGAPTDFRHVDGVKLTDVQEDLYMQVR 198

  Fly   254 --FDLAGNENDEVLNEFFVK---------------AGVSEVELKDRD------------------ 283
              .::...|.:|::.:..|:               ..|.||:.|::|                  
 Worm   199 SKLNVNNPEEEEIVKQVIVRNEDHIRQSLMVKKESQTVKEVKDKNKDKKKSKSFFGRNKPKVEDV 263

  Fly   284 ---------------------TRAFIYDFIQSNNVLAS-------------VKQYSVESP----- 309
                                 |.:....|..|:.|.|:             :|....|:|     
 Worm   264 SQPIVPVITGDPLNPDWTSNSTSSMSASFRSSSTVTAATSFKHSHTFAADPIKTTDWETPRKDTY 328

  Fly   310 --TETAAPM------------------------PPPVPTR----------------------HPS 326
              |....|.                        ||.:|:|                      |..
 Worm   329 GSTNQRQPQNIYKFEQEHVEQTYQIEKIEMDDTPPELPSRGASRNPEDQMTRGGLSTPRIPTHRD 393

  Fly   327 NGNQRTAPPLPPARQPPPA------------------VPVTVPGAARAPPPPNRPP----PISTA 369
            :....|.|...|.:.|||.                  |....|.....||||:.||    ||||.
 Worm   394 SYRWATKPDTVPKQTPPPTPNAPSHSHQVDQFAEFKLVEPKTPTRVAPPPPPSAPPTIKFPISTG 458

  Fly   370 P---PPPPVSAPVVAPPPP-------PPPPPAAV--PPPPPPPMPVGEIPVITTTHAPTQAARPA 422
            |   ...|.:.|..|||||       |.|.||.|  .||||||:|    |:.|.:..|     |.
 Worm   459 PSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLP----PIATPSSVP-----PP 514

  Fly   423 APAAPDPRNALMDAIRKGTQLKKVDTTALSTGSGDSRSDLMKDIR---QGTVLKPAKERELGSQR 484
            .|..|.|..||...|   :....|..||:...:.|.|| ||..||   :..||:...:.....|.
 Worm   515 PPPPPPPPPALEQEI---SGPPTVRLTAVPESNSDRRS-LMDQIRSTDRSQVLRKVSDTPETRQS 575

  Fly   485 NSDSGAGTDALADALRRALAARGNAIHSDEDETESSDNEGEW 526
            ...:.:||  :.|.::..|.||.:.|:..:.| ||.|::.||
 Worm   576 VPSTTSGT--IVDQIQNFLDARRSGINPSDSE-ESDDDDDEW 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WASpNP_001263045.1 WH1 31..140 CDD:144235 30/126 (24%)
PBD 233..291 CDD:279166 17/120 (14%)
WH2 <433..453 CDD:280384 5/19 (26%)
viro-2NP_741212.2 PH-like 23..133 CDD:388408 31/130 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 110 1.000 Inparanoid score I3450
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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