DRSC/TRiP Functional Genomics Resources

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Protein Alignment WASp and wsp-1

DIOPT Version :9

Sequence 1:NP_001263045.1 Gene:WASp / 43402 FlyBaseID:FBgn0024273 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001379549.1 Gene:wsp-1 / 177616 WormBaseID:WBGene00006957 Length:781 Species:Caenorhabditis elegans


Alignment Length:524 Identity:164/524 - (31%)
Similarity:216/524 - (41%) Gaps:143/524 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SDGHVGLNFVSEEE---C----DSFFRIVDAT---IETRN----------RKRQEKRNRQKSQQA 159
            |:|.|.:....:||   |    ||......||   :|...          |.|..|::...:..:
 Worm   287 SNGQVSVMVTKKEEPIYCSGGSDSSTESSSATPSSVEADTPPPIPSHPPARHRLVKKSSSSTSIS 351

  Fly   160 PN----APLPQVQREPA-----RPPPMQ--GGLSSTDGVQLRNNKINSVTLTPAPAPAQSKNFLS 213
            .|    .|..|.:...|     |.|||.  ||...|          ...|:..||......:..:
 Worm   352 LNGIGSTPTRQFEITQAYGGTIRGPPMAIGGGQGIT----------QMGTMAAAPQSHTHTDGNA 406

  Fly   214 SSFGL-----GNNAKDKKRKVTKADISRPTNFVHLSHVGWDAQKGFD--LAGNENDEVLNEFFVK 271
            ||.|.     .|..||||.|:.|.|||.||||.|.:||||:...||.  :..::.||........
 Worm   407 SSSGSWFRKDKNKKKDKKSKIKKEDISNPTNFQHKAHVGWNQDSGFSNTVYDDDMDEATKNILKA 471

  Fly   272 AGVSEVELKDRDTRAFIYDFIQSNNVLASVKQYSVES--PTETAAPMPPPVPTRHP--------- 325
            ||:....|.: |.:.|:..||..|    ..|..||.|  |::.::|:|||: .:||         
 Worm   472 AGLESNNLNE-DDKKFVKKFIAKN----YDKYVSVGSLDPSQISSPLPPPI-QQHPQMNQSWNQT 530

  Fly   326 -------------------SNGNQRTAPPLP---------PARQPPPAVPVTVPGAARAPP---- 358
                               |:.:...|||.|         |||.|||.......|.|.:.|    
 Worm   531 PVRQYKPSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQA 595

  Fly   359 -----PPNRPPPISTAPPPPPVS----APV--VAPPPPPPPPP-------AAVPPPPPPPMPVGE 405
                 |.|||..:...|||||..    ||:  .||||||||||       |..|||||||.|.| 
 Worm   596 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSG- 659

  Fly   406 IPVITTTHAPTQAARPAA-----PAAPDPRNALMDAIRKGTQLKKVDTTALS--TGSGDSRSDLM 463
                        |..||:     |.|.|.|:.|:..|:.|.||:.|..||.|  :..||:|.|:|
 Worm   660 ------------AGGPASVLAKLPPAQDGRSNLLAEIQAGKQLRSVQQTADSPKSAGGDARGDVM 712

  Fly   464 KDIRQGTVLK---PAKERELGSQRNSDSG-AGTDALADALRRALAAR--GNAIHSDEDETESSDN 522
            ..||||..||   .|.|:|  .::::.|| ||...||.||.:||..|  ...|....|:.:..|:
 Worm   713 AQIRQGAQLKHVDAAAEQE--RRKSTTSGAAGMGGLAGALAKALEERRMNMGIDDTSDDDDDEDD 775

  Fly   523 EGEW 526
            :.||
 Worm   776 KNEW 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WASpNP_001263045.1 WH1 31..140 CDD:144235 10/34 (29%)
PBD 233..291 CDD:279166 21/59 (36%)
WH2 <433..453 CDD:280384 9/21 (43%)
wsp-1NP_001379549.1 PBD 432..494 CDD:395634 22/62 (35%)
WH2_Pan1-like 673..694 CDD:409213 8/20 (40%)
WH2_WAVE-2 705..733 CDD:409215 14/29 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I8353
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D594307at33208
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 1 1.000 - - oto20242
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2175
SonicParanoid 1 1.000 - - X2034
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.040

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