DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1647 and Cp190

DIOPT Version :10

Sequence 1:NP_651636.1 Gene:CG1647 / 43401 FlyBaseID:FBgn0039602 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster


Alignment Length:1251 Identity:257/1251 - (20%)
Similarity:426/1251 - (34%) Gaps:338/1251 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NEEDTIDL-----DEPRMSQKIYELV------GFTV------SVDDK--MPQTICSQCVDKINDF 82
            |:.|..||     |..::  |::.||      .|.|      .|||.  ||....:..|..|.:|
  Fly    25 NKTDYCDLTLQFRDNSQL--KVHRLVLSACTDYFNVLEQTCEIVDDALIMPNEFQADVVVPIVNF 87

  Fly    83 -----YEFREMCYA----TNKQTRNLLGLKQIEPARLIDLKRIVKEERPISGAVGKRGRKRK--G 136
                 .||....|.    |.|:....:.||.:|..|. .::.:.:::||.|    .:|.:|:  |
  Fly    88 MYTGTLEFELKMYGKLLRTAKEMNMTVLLKLLEAHRR-TMENVNRQQRPPS----PKGIRRRTVG 147

  Fly   137 EES-----------WPKNNNVKPQVKKESFVWHKKQKLQPSQITSLVSKREP-----EIKDEPA- 184
            :.|           .|::.||...:.:.:...........|: ||..|.|.|     .:|.||. 
  Fly   148 QPSSGLPQQRVLGPSPQSRNVATPIAQRANTQRGSTGNTMSR-TSGGSNRSPYGDSSNVKQEPTS 211

  Fly   185 --EQ------------DTSLKGPP-KKAGRKSICSVCGEKFLSKELADEHKSLVHVPSIPRYICN 234
              ||            .|||..|| ||...:.:.....::.:.|::|.|:..     :.|.|...
  Fly   212 PFEQLRKGYNNNKRPAQTSLLSPPSKKPSLEEVKEFAEQQRMRKQIAAEYGD-----NDPEYDGG 271

  Fly   235 AC-NQTHHNQSDIRAHQLWHKLSKTPYKCPLCESSVANAYAFTRHLREHTPPTPVQLLVLDRECP 298
            .. :..|....|.         ...|   |...:|...:...|:...||...|    ::|.::.|
  Fly   272 MLYDDVHAGDDDD---------DDMP---PQPSTSKQQSPQGTQTQLEHGSTT----IILKQDSP 320

  Fly   299 LCKKTFVTNFFYNTHRCAIRKRKCGGCSRTLNTEAAYMRHAPTCPKIYLNHSKHI------MPQV 357
            ....|.:.....|..                                 |||:|.|      .|.:
  Fly   321 SQTPTIIVKDSSNAK---------------------------------LNHTKIIAEVLRQYPHI 352

  Fly   358 VTNEAQMLIKNEIEEELLGLP-----PATTVPP----------------DFVIDEGMQPVVVLER 401
            |.....  ||.:|.......|     |||..||                .|..|:....:...::
  Fly   353 VKGHKN--IKLKIMPNTPAAPTEKSAPATVKPPANQSSATTSPHKKLHVSFKADKSTPLITAQQK 415

  Fly   402 LSSPLLRSSSGTDQLVA--AKSKNSDRVSARNYLKRVDQLLKNTINTLVSIKHEPEVHINDTGP- 463
            .:|.  :..|||.|...  ....|....:|....:|:|   ..|::.|::...|     |.||| 
  Fly   416 AASS--QQKSGTSQTTGNQGTGANPPANTAAAQKRRID---SKTMHALIAQGAE-----NTTGPW 470

  Fly   464 ------PRGQAESDPEPERNEEH--PSFGDDIQAANDECQEC----------------QPETESD 504
                  ..|:..|.|.......|  .:..:.|..|  .|:.|                :.:|:|.
  Fly   471 LCLRCGVNGRPISIPSYRGFRRHLINTHKETIDPA--LCEHCGWRSVNNRELHFHMYMEHQTKSL 533

  Fly   505 KISVAACDDIPSVSVKQEPEYDGY--------EKQ-----TGVKQEPLKLKLKITKNHGK--LNS 554
            ..:.|.| .:.:.|.:.:.|.:.:        .||     ..|.::.|:|...:...|.:  |..
  Fly   534 LYTFAEC-ALCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALED 597

  Fly   555 SLIDDLDEAGQAFGRSSKKKKKRKHKEREKEASNETENCRTESQNQPAIKIKQEPVDYAPEATVM 619
            .:||:.||  :..|...::::....:|:|.|   :|...|..|             |.:..||..
  Fly   598 GIIDETDE--EFLGSQDEEEEAEGDEEQEPE---QTGKVRILS-------------DISLPATSA 644

  Fly   620 TTIPMTQFESSLNESERSEEVDEAMIQSQEDVK-----PNRMEL------DRMMQISNVTSGVDM 673
            .|:...|     .|..:.|:|:    |.|::||     .|.:||      :.:.|::...:|...
  Fly   645 ITVQQAQ-----QEQLQEEDVE----QVQQEVKFVGADGNEVELTDEQRKEILSQLNQQQAGATA 700

  Fly   674 AEEAMALERAEEACPEDSLHKVKSVKSTARKSTGGAER-----KTYSPPRTNTLPQIVAVVSGES 733
            ....|.|.       |.....||  :.|..||..|.|.     :.||        ::.|..|.||
  Fly   701 GGVVMVLS-------EPEAEHVK--QETDEKSLAGTEEEYDDSQIYS--------ELGAADSVES 748

  Fly   734 AFNMISIKPEPRNLGYGDEEPEDQRETTEEINHNDMMEEEKEYIGSLDLSDVSVKQERELDICEI 798
            |         .:|:....:|..|..|..|.:......:..||........|:|.|. :||     
  Fly   749 A---------KKNIADESKESIDNLEWAENLIAESEEQSNKEPKSDKPRDDISEKL-KEL----- 798

  Fly   799 DAVHRNGLEKSDEDDDDGNEDSASSADEAEEAMERDTEERIYREIELPPLELQN-----ESSRKD 858
                 .|....||:||| .:|..::|:.|.|...:|.|..::.|.:...|.||:     |.:.::
  Fly   799 -----TGDWTEDENDDD-VDDKPATAELASELANKDPEPTVHEEEDDIDLALQSLHKGPEEATEE 857

  Fly   859 LESERMDTEVSTALPASETPSQTRDVLGVEKSEASAFSLVITNICSQAVPQ--PSAACSNDIECS 921
            ..||...|....|:.|....:...:.:.|: |||:      ....|:|..|  ..|...||.|..
  Fly   858 KASEESVTSADDAVDAVPNINSQPEKMDVD-SEAA------DEKASKAEVQIKKEAELENDQEEF 915

  Fly   922 I-GPSPSTTNEPHSHTVENVQSPANDLQTSAQVAIAAQSQPDPCIVSQPAASSESQADTKDLPPA 985
            | ..||.    |||.:|..::......:....|.:.|.:.... ::.:..|.:|.....||:   
  Fly   916 IKEDSPI----PHSDSVAELREAVTASEGEDDVHLEADNIRKE-LLDELIAEAEKPDQEKDI--- 972

  Fly   986 ASQIQTFNTESLPIHVHSETEDNSIENDASYLESRAQVDCQSAGTENPSV--VLEQNESLPSGSC 1048
            ....:...||:|         |.|: .|...|....||..:....:.|:.  ..|.||...:.. 
  Fly   973 VQSEENATTEAL---------DRSV-TDEDDLVPPTQVSTEQMEIDEPAAEKAAENNEDTRTAD- 1026

  Fly  1049 VSPIPENPSPGNSPPQHDESESLDKPEMAAGSAYCLATVSLDAPKDTEALALPPCDAAIIDSNYT 1113
                 |..:..:.|.|..:..:.:||.:.:..|.       |.....||.::....:.|.:....
  Fly  1027 -----EKEAVEDKPNQTQDVTTAEKPTLESAKAG-------DEATSGEAASVDKVKSLISEWGDD 1079

  Fly  1114 SDEEQQNVLNHELSEQ 1129
            .::|.:|.::....|:
  Fly  1080 DEDEDENGVSAAAKEE 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1647NP_651636.1 zf-AD 19..95 CDD:214871 22/85 (26%)
C2H2 Zn finger 203..224 CDD:275368 3/20 (15%)
C2H2 Zn finger 233..253 CDD:275368 2/20 (10%)
C2H2 Zn finger 262..282 CDD:275368 3/19 (16%)
C2H2 Zn finger 297..314 CDD:275368 3/16 (19%)
Cp190NP_524359.2 BTB_POZ_CP190-like 16..125 CDD:349620 27/102 (26%)
COG5236 <471..>594 CDD:227561 20/125 (16%)
C2H2 Zn finger 540..568 CDD:275371 4/28 (14%)
C2H2 Zn finger 569..586 CDD:275371 3/16 (19%)
PTZ00121 <709..1075 CDD:173412 96/434 (22%)

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