DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1647 and Lmpt

DIOPT Version :9

Sequence 1:NP_651636.1 Gene:CG1647 / 43401 FlyBaseID:FBgn0039602 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster


Alignment Length:1373 Identity:260/1373 - (18%)
Similarity:447/1373 - (32%) Gaps:400/1373 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 EPARLIDLKRIVKEERPISGAVGKRGRKRKGE-ESWPKNNNVK--PQVKKESFVWHKKQKLQPSQ 167
            |.|..||.:.| :.|||      .||...:.| .:.||:::.:  .:.:.|..|...||:|...|
  Fly   614 EKALSIDEEEI-ELERP------SRGEDVEEEATNEPKSSSFEEATEAQNEQAVAALKQQLSKEQ 671

  Fly   168 ITSLVSKREPEIKDEPAEQDTSLKGPPKKAGRKSICSVCGEKFLSKELADEHKSLVHVPSI---P 229
            :     .:|.| ||.|...|||       ...||        .|...:|.|.:|....|.:   |
  Fly   672 L-----DKEAE-KDNPQAVDTS-------DSNKS--------NLQTSIAAEEQSRGGSPGLRRSP 715

  Fly   230 RYICNACNQTHHNQSDIRAHQLWHKLSKTPYKCP------------------LCESSVANAYAFT 276
            |     .::..|......|.|....:.:.|.:..                  |....:::.|.||
  Fly   716 R-----MDEMEHYPERWSASQEQQSVQQQPPRTAPAINVQQPDTAPWRDQYGLLMEGLSDFYDFT 775

  Fly   277 --------RHLREHTPPTPVQLL-VLDRECPLCKKTFVTNFFYNTHRCAIRKRKCGGCSRTL--- 329
                    |....:..|.|..:. ::|                            |...|:|   
  Fly   776 ASVNPSRSRSASRNPSPAPKNVANLMD----------------------------GDTERSLEVY 812

  Fly   330 -NTEAAYMRHAPTCPKIY------LNHSK----HIMPQVVTNEAQ------MLIKNEIEEELLGL 377
             :|:...|.....|..:.      ||.::    .:..|.|.::|:      .::...:|...||.
  Fly   813 DDTQEGVMAGELNCESVLQLLESNLNETESTNDQLQVQTVADDARDGKSILPMVHEPLESSALGA 877

  Fly   378 PPATTVPPDFVIDE-GMQPVV------VLERLSSPLLRSSSGTDQLVAAKSKNSDRVSARNYLKR 435
                      |::| |.:|.|      ...|..|||..|    :.|..:..|..:|:     :|:
  Fly   878 ----------VLEERGREPSVGRIQSRSRSRSRSPLPTS----ENLEKSIHKRRERL-----IKQ 923

  Fly   436 VDQLLKNTIN-------------------TLVSIKHEPEVHIND-TGPPRGQAESDPE------- 473
            .|:|.:...:                   ||.....:|.:.||: ...|...||:.||       
  Fly   924 NDELAERLSHSSPEDSMEIETSDNGRLSPTLEVTLPQPVIEINEMADEPMEDAETTPEEMRLFVE 988

  Fly   474 ---PERNEEH----------PSFGDDIQAA-----------NDEC-QECQPETESDKISVAACD- 512
               .|||...          |:.| :|:.:           |||. ::...:..|.:|.:.:.. 
  Fly   989 TLRAERNARSRSRSRSRSPLPTAG-NIEKSLESRRLKRIQHNDEIFEKLHDQMSSPQIIIESASP 1052

  Fly   513 -----DIPSVSVK--QEPEYDGYEKQTGVKQEPLKLKLKITKNHGKLNSSLIDDLDEAGQAFGRS 570
                 .:|::|::  :.||    |..:..:.||                   :|..|:.......
  Fly  1053 PSLPLPLPTISIEIAEPPE----ENASHTEAEP-------------------EDTPESMARLFEQ 1094

  Fly   571 SKKKKKRKH-KEREK---------EASNETENCRTESQNQPAIKIKQEPVDYAPEATVMTTIPMT 625
            .:..:.|.| :.|.:         |.|.:....|..:||....::.||........|.:|...:.
  Fly  1095 LRLNRVRSHSRSRSRSPLPTPANLEQSVQKRRERLIAQNDQFFEVLQERARTPEPETRLTVEYVY 1159

  Fly   626 QFESSLNE------SERSEEVDEAMIQSQE------------------DVKPNRMELDRMMQISN 666
            ::....:|      .:||.....:..||||                  .::.|..||:.::.:..
  Fly  1160 EYVQEKDEQVGEGRDKRSLSPSRSRSQSQEKALDDFHLMLNLEGSELRTLRKNSEELESVLAVGA 1224

  Fly   667 VTSGVDMAEEAMALERAEEACPEDSLHKVKSVKSTARKSTGGAERKTYSPPRTNTLPQIVAVVSG 731
            ....|||.    |||:...|..|..|..:....|...:.   .|....:|....|:.::...:..
  Fly  1225 KQREVDMD----ALEKLHNANEEIELRVLSPTNSELERV---VEMTRENPDMDRTVSEVARDLQD 1282

  Fly   732 E---SAFNMISIKPEPRNLGYGDEEPEDQRETTEEINHNDMMEEEKEYIG-SLDLSDVSVKQERE 792
            |   |.|...:...|..:|| .|:..|.:||..:      .........| |:|.:......:||
  Fly  1283 ELMASGFKRSTYVGESLDLG-SDQFKELRREAAQ------FQRSRSPSPGSSMDYAREQAAAQRE 1340

  Fly   793 LDICEIDAVHRNGL-----EKSDEDDDDGNEDSASSADE-----AEEAMERDTEERIYREIELPP 847
            |....:|::..:.|     ..|:|...:..:.||:..|:     ||....|.......||:||..
  Fly  1341 LQTAILDSLTESRLGAKPKTYSEERTGEFEDISAAQLDDLRHRTAEFQRSRSQSRSPLREVELTQ 1405

  Fly   848 L-ELQNESSRKDLESERMDTEVSTALP-------------ASETPSQTRDVLG-VEKSEASAFSL 897
            | :::.||::::|:.:.:|...::::.             .||..:....::| :|..|...|..
  Fly  1406 LRDIEAESAKRELQDQLLDRLAASSINFENFSRHLNADFLDSERRASDSALMGDMEPDEYHHFRR 1470

  Fly   898 VITNICSQAVPQPSAACSND-------IECSIGPSPST-------TNEPHSHTVENVQSPANDLQ 948
            .     |.|..||.....:|       ||........|       |:||:..:  :.:||..|..
  Fly  1471 Y-----SLAQEQPVEEYPSDDYVYISQIEVRTLTGTRTWLKEDFYTHEPNDFS--DSKSPVRDED 1528

  Fly   949 TSAQVAIAAQSQP----------------DPCIVSQPAASSESQADTKDLPPAASQIQTF----- 992
            :.|:..:||:::.                |...:.|..:||....||:...........|     
  Fly  1529 SWARAVLAAEAEAAEFDSTNAIYSYDIVGDHENLDQERSSSNDSEDTRQTVVEIDDEDEFEFELD 1593

  Fly   993 ------NTESLPI---HVHSETEDNSIENDASYLESRAQVDCQSAGT------------------ 1030
                  |..:.|.   | |..:|....|.:|...|:|...|.:....                  
  Fly  1594 EGISDNNERTQPTDESH-HDTSECEEAERNADRYENRGAQDWEEVDDVEDFLDYGFDDGAVGGAT 1657

  Fly  1031 --ENPSVVLEQ--NESLPSGSCVSPIPENPSPGNSPPQHDESESLDKPEMAAGSAYCLATVSLDA 1091
              .:|...:||  ||::.:......:.|..:........|.|||..:...:....|.|...:.:.
  Fly  1658 PYSDPDSFIEQIYNEAIKNRKQSGILREYETIVQEQLPSDLSESEKEKSGSDSEKYALWAKTREL 1722

  Fly  1092 PK--------DTE-ALAL-PPCDAAIIDSNYTSDEEQQNVLNHELSEQQLAIMEHRQLLVHEEQP 1146
            .:        |.: ||.| |..|....:..|..|.       |.::.|...:..........|..
  Fly  1723 ERSHSGTRHSDVDIALGLIPESDHRDSEMRYLGDA-------HVVARQSTRLRTRYGFNPKLEVG 1780

  Fly  1147 ALLEVIPPGLSSRPIEETENRINEQQQDLEQGE-------ERPPRFQANDDSNINEIAENNNNAN 1204
            .|.:.|...|:.:|..|...|.|.:..|.|:||       |.....:|.|... .|....:....
  Fly  1781 DLEDDIEVDLNYKPKREYNWRKNFRLDDNEEGERSVQVKTEEDEEQEARDQFE-EEFGWQDREQE 1844

  Fly  1205 IERELQDD 1212
            :|.||..|
  Fly  1845 LEEELYQD 1852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1647NP_651636.1 zf-AD 19..99 CDD:285071
C2H2 Zn finger 203..224 CDD:275368 4/20 (20%)
C2H2 Zn finger 233..253 CDD:275368 3/19 (16%)
C2H2 Zn finger 262..282 CDD:275368 5/45 (11%)
C2H2 Zn finger 297..314 CDD:275368 0/16 (0%)
LmptNP_996113.2 GBP_C <103..201 CDD:303769
ARGLU 110..255 CDD:291991
coiled coil 170..181 CDD:293879
coiled coil 190..201 CDD:293879
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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