DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1647 and Muc18B

DIOPT Version :10

Sequence 1:NP_651636.1 Gene:CG1647 / 43401 FlyBaseID:FBgn0039602 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_573365.1 Gene:Muc18B / 32913 FlyBaseID:FBgn0031000 Length:308 Species:Drosophila melanogaster


Alignment Length:275 Identity:56/275 - (20%)
Similarity:90/275 - (32%) Gaps:73/275 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   845 LPPLELQNESSRKDLESERMDTE-VSTALP------ASETPSQTRDVLGVEKSEASAFSLVITNI 902
            :||..|...::.|........|| |:||.|      .:|.|..|..:    .:||...:..||..
  Fly    91 IPPSNLDESTTEKPATEAPGTTEKVTTAAPGTTEKVTTEAPGTTEKI----TTEAPGTTEKITTE 151

  Fly   903 CSQAVPQPSAACSNDIECSIGPSPSTTNEPHSHTVENVQSPANDL-------QTSAQVAIAAQSQ 960
            ......:.:.......|.....:|.||.:|.:......:.||.|.       :|:.......:|.
  Fly   152 APGTTEKITTEAPGTTEKITTEAPGTTEKPATDAPGTTEKPATDAPGTTEKSETTDAPGTTDKSD 216

  Fly   961 PDPCIVSQPAASSESQADTKDLPPAASQIQTFNTESLPIHVHSETEDNSIENDASYLESRAQVDC 1025
            .|..|..:|     |.|:|....|        |||:.     ...|:.:||::.          |
  Fly   217 TDAPITDEP-----STAETSTDEP--------NTETT-----ESGEETTIEDNV----------C 253

  Fly  1026 QSAGTENPSVVLEQNESLPSGSCVSPIPENPSPGNSPPQHDESESLDKPEMAAGSAYCLATVSLD 1090
            .:.|.            .|:|||...|..:.:.|:              |:.|.:..|...:..|
  Fly   254 ATTGL------------FPTGSCTHFIVCSYAEGD--------------ELKAYTKKCPGEMQFD 292

  Fly  1091 APKDTEALALPPCDA 1105
             |.::...|...|.|
  Fly   293 -PFNSVCSASYDCTA 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1647NP_651636.1 zf-AD 19..95 CDD:214871
C2H2 Zn finger 203..224 CDD:275368
C2H2 Zn finger 233..253 CDD:275368
C2H2 Zn finger 262..282 CDD:275368
C2H2 Zn finger 297..314 CDD:275368
Muc18BNP_573365.1 CBM_14 26..72 CDD:426342
motB <90..208 CDD:183756 26/120 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.