DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1647 and REPIN1

DIOPT Version :9

Sequence 1:NP_651636.1 Gene:CG1647 / 43401 FlyBaseID:FBgn0039602 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001374966.1 Gene:REPIN1 / 29803 HGNCID:17922 Length:626 Species:Homo sapiens


Alignment Length:351 Identity:71/351 - (20%)
Similarity:106/351 - (30%) Gaps:128/351 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 CYATNKQTRNLLGLKQIEPARLIDLKRIVKEERPIS-GAVGKR----------GRKRKGEESWP- 141
            |....|:.|:       :| .||..:|:...|||.. ...|||          .|...||:.:| 
Human   297 CACCGKRFRH-------KP-NLIAHRRVHTGERPHQCPECGKRFTNKPYLTSHRRIHTGEKPYPC 353

  Fly   142 ----KNNNVKPQVKKESFVWHKKQK----------------------LQPSQITSLVSKREPEIK 180
                :....||.:...|.: ||:.:                      .:|:....|...:||...
Human   354 KECGRRFRHKPNLLSHSKI-HKRSEGSAQAAPGPGSPQLPAGPQESAAEPTPAVPLKPAQEPPPG 417

  Fly   181 DEPAEQDTSLKGPP-------------------------------------KKAGRKS------- 201
            ..|......::.||                                     |..|:|:       
Human   418 APPEHPQDPIEAPPSLYSCDDCGRSFRLERFLRAHQRQHTGERPFTCAECGKNFGKKTHLVAHSR 482

  Fly   202 --------ICSVCGEKF-LSKELADEHKSLVHVPSIPRYICNACNQTHHNQSDIRAHQLWHKLSK 257
                    .|..||.:| ....||...:.  |.|..| ::|..|.:...::..:.||:..|...|
Human   483 VHSGERPFACEECGRRFSQGSHLAAHRRD--HAPDRP-FVCPDCGKAFRHKPYLAAHRRIHTGEK 544

  Fly   258 TPYKCPLCESSVANAYAFTRHLREHTPPTPVQLLVLDRECPLCKKTFVTNFFYNTHR-------- 314
             ||.||.|..:.:.......|.|.||...|.       .||.|.::|.......|||        
Human   545 -PYVCPDCGKAFSQKSNLVSHRRIHTGERPY-------ACPDCDRSFSQKSNLITHRKSHIRDGA 601

  Fly   315 --CAIRKRKCGGCSRTLNTEAAYMRH 338
              |||       |.:|.:.|...:.|
Human   602 FCCAI-------CGQTFDDEERLLAH 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1647NP_651636.1 zf-AD 19..99 CDD:285071 3/9 (33%)
C2H2 Zn finger 203..224 CDD:275368 6/21 (29%)
C2H2 Zn finger 233..253 CDD:275368 4/19 (21%)
C2H2 Zn finger 262..282 CDD:275368 5/19 (26%)
C2H2 Zn finger 297..314 CDD:275368 5/16 (31%)
REPIN1NP_001374966.1 C2H2 Zn finger 118..138 CDD:275368
C2H2 Zn finger 146..166 CDD:275368
C2H2 Zn finger 177..197 CDD:275368
COG5048 <197..371 CDD:227381 19/81 (23%)
C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 238..258 CDD:275368
COG5048 292..599 CDD:227381 64/321 (20%)
C2H2 Zn finger 297..317 CDD:275368 7/27 (26%)
C2H2 Zn finger 325..345 CDD:275368 4/19 (21%)
C2H2 Zn finger 353..373 CDD:275368 3/20 (15%)
C2H2 Zn finger 436..456 CDD:275368 0/19 (0%)
C2H2 Zn finger 464..484 CDD:275368 3/19 (16%)
C2H2 Zn finger 492..512 CDD:275368 6/21 (29%)
C2H2 Zn finger 520..540 CDD:275368 4/19 (21%)
C2H2 Zn finger 548..568 CDD:275368 5/19 (26%)
C2H2 Zn finger 576..596 CDD:275368 7/19 (37%)
C2H2 Zn finger 604..624 CDD:275368 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24406
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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