DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1647 and zormin

DIOPT Version :10

Sequence 1:NP_651636.1 Gene:CG1647 / 43401 FlyBaseID:FBgn0039602 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_001261317.1 Gene:zormin / 2769001 FlyBaseID:FBgn0052311 Length:3664 Species:Drosophila melanogaster


Alignment Length:1544 Identity:275/1544 - (17%)
Similarity:470/1544 - (30%) Gaps:558/1544 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DRFAFKIDAALKANLCTICRLCGIDNPG----KVPILLPNE----------------EDTIDLDE 46
            |||.|:            |.:.|...|.    |..|.:...                |:|...|.
  Fly  1405 DRFVFE------------CEVTGTPEPAVEWFKDGISIQTNSDYKTTFDKGICRLVIEETFAADS 1457

  Fly    47 PRMSQKIYELVG-----FTVSVDDK------MP------------------QTIC---------- 72
            .|.|.:...|||     .|:||.:.      :|                  |..|          
  Fly  1458 ARFSCRASNLVGTCDTNATLSVRENAAEVQLVPPRILRFLQSGKATEGSSFQFACVVAGVPLPTV 1522

  Fly    73 -----SQCVDKINDF----------YEFREM---------CYATN----KQTRNLLGLKQIEPAR 109
                 .:|:|...|:          .:|.|:         |.|:|    :.....|.::.:||..
  Fly  1523 QWFKNDKCIDDSPDYVISYNNGEATLKFEEVFLEDDAVYTCSASNPAGIEHCSASLIVEPLEPTE 1587

  Fly   110 LIDLKRIVKEERPISGAVGKRGRKRK----------GEESWPKNNNVKPQVKKESFVWHKKQKLQ 164
            |...|      .|:|.|:.:.|:|.|          .|..|..|.  ||...::|       |.:
  Fly  1588 LPSFK------VPLSNAMARVGQKIKLEAIVGGIPRPEVYWLHNG--KPFQPRDS-------KYE 1637

  Fly   165 PSQITSLVSKREP--------EIKDEPAEQDTSLKGPPKKAGRKSICSVCGEKFLSKELADEH-- 219
            ..::|.::.:..|        ..|:...|..||             |:|..:..|..|.:|..  
  Fly  1638 YGRVTLIIPQAYPNDAGSYVLSAKNLAGEAYTS-------------CNVIVKGRLPNETSDSEMA 1689

  Fly   220 ------KSLVHVP----SI-----PRYICNACNQT------HHNQSDIRAHQLWHKLSKTPYKCP 263
                  |..||:|    ||     .|..|....|.      :||:.                  |
  Fly  1690 SDIEPIKPAVHLPLKDVSIFEGKPVRLDCVIVGQPEPEVIWYHNER------------------P 1736

  Fly   264 LCESSVANAYAFTRHLREHTPPTPVQLLVLDRECPLCKKTFVTNFFYNT---HRCAIRKRKCGGC 325
            :.||:                  .||||.....|.|     :....|..   |...:.....|..
  Fly  1737 VKESA------------------DVQLLFQGDRCSL-----IIQEVYQEDAGHYKVVAINSAGEA 1778

  Fly   326 SRTLNTEAAYMRHA----------PTCPKIYLNHSKHIMPQVVTNEAQMLIKNEIEEELLGLPPA 380
            |.:...:...:..|          .:.||......:.::..|:.:|.:.::   :|.:..|..|.
  Fly  1779 SSSCELKVTPLNQAEPATRAQAERQSLPKDSQPKFERLLSDVLADEGEQVV---LEVQASGDQPL 1840

  Fly   381 T----------------TVPPDFVI-------------DEGMQPV--------------VVLERL 402
            |                |...|..:             |:|:..|              ::::.:
  Fly  1841 TAQWFLTNKELQLDQRITTQSDSELGVFKLILNNVSGDDKGVYTVKVTNPAGDAKCFSHLIVKSV 1905

  Fly   403 SSPLLRSSSGTD-------QLVAAKSKNSDRVSARNYLKRVDQLLKNTINTLVSIKHEPEVH--I 458
            ::|..|.||.:.       |....|...||:..      .:|:::|  ...:|..|..|:||  .
  Fly  1906 NAPENRRSSQSSVEIIERHQCPEFKELFSDKQG------EIDEVIK--FECIVKGKPTPKVHWFF 1962

  Fly   459 ND------------------------TGPPRGQAESDPEPE------------RNEEHPSFGDDI 487
            ||                        |....|:.....|.|            |....|: ..|:
  Fly  1963 NDQPVHGHNFLVSTSGERQVLTIQKLTHDAVGKISCVAENEAGKATCVAFLNIRGSGLPA-SSDV 2026

  Fly   488 QAANDECQECQPETESDKISVAACDDIPSVSVKQEPEYDGYEKQTGVKQEPLKLKLKITKNHGKL 552
            |..:.|     ..|||.::::.. ....:.|..|...|:|...||.|             :|...
  Fly  2027 QTVSQE-----HNTESSRVTIKK-QTFTTTSTSQVNSYEGNAPQTEV-------------HHSSA 2072

  Fly   553 NSSLIDDLDEAGQAFGRSSKKKKKRKHKE---REKEASNETENCRTES-------QNQPAIKIKQ 607
            :      :|::.:..|:...:..:..|.:   :.||.|:.|...::.|       ..|.|:.|..
  Fly  2073 H------IDQSLKQLGQQRPEIVESHHYQELHKSKEMSSPTVQQKSFSFIQSSGANGQSAVAIPD 2131

  Fly   608 EPVDYAPEATVMTTIPMTQFESSLNESERSEEVDEAMIQSQEDVKPNRMEL--DRMMQISNVTSG 670
            .|.....|.....|.|::............|.:.:.....:..|:.|..:|  |...:|||..:.
  Fly  2132 SPTRLRREIAPRFTTPLSGKIVDQGADVSMEAIYDGFPSPEIKVEKNGGQLFEDAHTRISNKCNR 2196

  Fly   671 VDMAEEAMALERAEEACPEDSLHKVKSVKSTARKSTGGAE---RKTYSPPRTNTLPQIVAVVSGE 732
            |.:..:.:.:        .|:.....:..:|..:||..|:   :||..||......|......||
  Fly  2197 VTIELKQVGV--------GDAGRYAVTASNTVGQSTSTADLVVKKTIFPPVFGRRLQAQVSKKGE 2253

  Fly   733 SAFNMISIK--PEPRNLGYGDEEPEDQRETTEEINHNDMMEEEKEYIGSLDLSDVSVKQERELDI 795
            .....:.:.  |||......|::|                           |.|..:.:.|   :
  Fly  2254 KLTMEVEVTGLPEPTVTWLKDDKP---------------------------LKDAGISEHR---L 2288

  Fly   796 CEIDAVHRNGLEKSDEDDD--------DGNEDSASSAD-----EAEEAMERDTEERIYREIELPP 847
            ......:|..:||:...|.        :...::.|.||     .:.|.::...:..:|....:.|
  Fly  2289 LAQGNSYRLIIEKAQTTDSGKYMVRATNAGGEAKSIADCAILEPSPERLQEVVKTIVYETGPVAP 2353

  Fly   848 L---------ELQNESSRKDLESERMDTEVSTALPASETPSQTRDVLGVEKSEASAFSLVIT-NI 902
            .         ::||..:::..::.:  |||::|          .|:.|:.:|:      ||| :.
  Fly  2354 ASEFKTEVQKQIQNSENQQSYQNSQ--TEVTSA----------NDLHGLSESK------VITEHR 2400

  Fly   903 CSQAVPQPSAACSNDIECSIGPSPSTTNEPHSHTVENVQSPANDLQT-SAQVAIAAQSQPDPCIV 966
            |:..........||.::.     |..|..|.:.|       .||..| :...|..:..|||   :
  Fly  2401 CTTEATMRLEHKSNYLDL-----PELTTRPKTPT-------TNDTITITTNTATVSMDQPD---L 2450

  Fly   967 SQPAASSESQADTKDLPPAA-------------SQIQTFNTESLPIHVHSETEDNSIENDASY-- 1016
            :||..::.:..:|..:||..             .|.|....::|....:.::|..|..:.:|:  
  Fly  2451 TQPTITNTTTTNTTKVPPPVPPKPCTPVVATTFGQQQQQPPQTLTSTRYEQSEHKSTTSSSSFDY 2515

  Fly  1017 ------------------------------------------LESRAQVDCQSAGTE--NPSV-- 1035
                                                      :...|...|.|..||  .|.:  
  Fly  2516 FKKIDEETIIQRPNPLTFKPLDTVVRQPQAQSLAEELRSLNLIPGDAPEFCYSPKTERSEPKIPL 2580

  Fly  1036 VLEQNESLPSGSCVSPIPENPSPGNSPP------QHDESESLDKPEMAAGS-----AYCLATVSL 1089
            :.|:.:.|.......|.|:...|...||      || ||.:..:.::..|.     |..|||.:.
  Fly  2581 ITEKIKILSEVQPKEPPPQGGVPVFPPPLGLQTVQH-ESTTTKEVKVEYGQPIVRPAAVLATPAQ 2644

  Fly  1090 DAPK------DTEALALPPCDAAIIDSNYTSDEEQQN---------------VLNHELSEQQLA- 1132
            ..|:      ..|.:|:.........:.||||.||::               .||......|:| 
  Fly  2645 QNPRSPSPKPSAEGVAMSRLWTPTGVTGYTSDVEQKSEKTVISKLATPTPTKELNAPFLVNQIAK 2709

  Fly  1133 -IMEHRQLLVHEEQPALLEVIPPGLSSRP-IEETENR--INEQQQDLEQ 1177
             |......:.|.....|....||.:...| :|||..|  :...:|.|||
  Fly  2710 SIPPTTAPVTHLVNVELEPGTPPEICFAPKVEETRRRSLVETMEQKLEQ 2758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1647NP_651636.1 zf-AD 19..95 CDD:214871 27/162 (17%)
C2H2 Zn finger 203..224 CDD:275368 6/28 (21%)
C2H2 Zn finger 233..253 CDD:275368 4/25 (16%)
C2H2 Zn finger 262..282 CDD:275368 3/19 (16%)
C2H2 Zn finger 297..314 CDD:275368 3/19 (16%)
zorminNP_001261317.1 SPEC 126..332 CDD:238103
SPEC <504..641 CDD:413338
SMC_prok_B 654..>1389 CDD:274008
Smc <1192..>1377 CDD:440809
I-set 1390..1479 CDD:400151 18/85 (21%)
Ig strand B 1407..1411 CDD:409564 2/15 (13%)
Ig strand C 1420..1424 CDD:409564 0/3 (0%)
Ig strand E 1445..1449 CDD:409564 0/3 (0%)
Ig strand F 1459..1464 CDD:409564 2/4 (50%)
Ig strand G 1472..1475 CDD:409564 0/2 (0%)
I-set 1491..1580 CDD:400151 11/88 (13%)
Ig strand B 1508..1512 CDD:409353 1/3 (33%)
Ig strand C 1521..1525 CDD:409353 0/3 (0%)
Ig strand E 1546..1550 CDD:409353 0/3 (0%)
Ig strand F 1560..1565 CDD:409353 1/4 (25%)
Ig strand G 1573..1576 CDD:409353 0/2 (0%)
I-set 1589..1675 CDD:400151 22/113 (19%)
Ig strand B 1606..1610 CDD:409353 1/3 (33%)
Ig strand C 1619..1623 CDD:409353 1/3 (33%)
Ig strand E 1641..1645 CDD:409353 1/3 (33%)
Ig strand F 1655..1660 CDD:409353 0/4 (0%)
Ig strand G 1668..1671 CDD:409353 2/15 (13%)
I-set 1702..1786 CDD:400151 21/124 (17%)
Ig strand B 1714..1718 CDD:409353 1/3 (33%)
Ig strand C 1727..1731 CDD:409353 0/3 (0%)
Ig strand E 1752..1756 CDD:409353 2/8 (25%)
Ig strand F 1766..1771 CDD:409353 1/4 (25%)
Ig strand G 1779..1782 CDD:409353 1/2 (50%)
I-set 1811..1902 CDD:400151 11/93 (12%)
Ig strand B 1828..1832 CDD:409353 0/6 (0%)
Ig strand C 1841..1845 CDD:409353 1/3 (33%)
Ig strand E 1868..1872 CDD:409353 0/3 (0%)
Ig strand F 1882..1887 CDD:409353 1/4 (25%)
I-set 1927..2015 CDD:400151 16/95 (17%)
Ig strand B 1944..1948 CDD:409353 1/5 (20%)
Ig strand C 1957..1961 CDD:409353 2/3 (67%)
Ig strand E 1981..1985 CDD:409353 0/3 (0%)
Ig strand F 1995..2000 CDD:409353 0/4 (0%)
Ig strand G 2008..2011 CDD:409353 0/2 (0%)
Ig 2142..2231 CDD:472250 16/96 (17%)
Ig strand B 2159..2163 CDD:409353 0/3 (0%)
Ig strand C 2172..2176 CDD:409353 0/3 (0%)
Ig strand E 2197..2201 CDD:409353 1/3 (33%)
Ig strand F 2211..2216 CDD:409353 0/4 (0%)
Ig strand G 2224..2227 CDD:409353 1/2 (50%)
I-set 2238..2325 CDD:400151 17/116 (15%)
Ig strand B 2255..2259 CDD:409353 0/3 (0%)
Ig strand C 2268..2272 CDD:409353 0/3 (0%)
Ig strand F 2309..2314 CDD:409353 0/4 (0%)
PHA03247 <2593..2893 CDD:223021 41/167 (25%)
I-set 3566..3655 CDD:400151
Ig strand B 3583..3587 CDD:409353
Ig strand C 3596..3600 CDD:409353
Ig strand E 3621..3625 CDD:409353
Ig strand F 3635..3640 CDD:409353
Ig strand G 3648..3651 CDD:409353
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.