DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1647 and Rp1

DIOPT Version :10

Sequence 1:NP_651636.1 Gene:CG1647 / 43401 FlyBaseID:FBgn0039602 Length:1222 Species:Drosophila melanogaster
Sequence 2:NP_035413.1 Gene:Rp1 / 19888 MGIID:1341105 Length:2095 Species:Mus musculus


Alignment Length:1441 Identity:255/1441 - (17%)
Similarity:480/1441 - (33%) Gaps:438/1441 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 DKINDFYEFREMCYATNKQTRNLLGLKQIEPARLIDLKRIVKEERPISGAVGKRGRKRKGEESWP 141
            :|:|.|         .|.:|:.||..::..|.:::..:|:.|:|      :|:..:.....:|..
Mouse   743 NKLNTF---------QNPKTQKLLAKRKSRPRKIVSTERLRKQE------IGQEDKILLHSDSKL 792

  Fly   142 KNNNVKPQ--------VKKESFVWHKKQKLQPSQITSL------VSKRE--PEIKD--------- 181
            ..::::.|        ::::..|.|:    .|.|:..:      ::|:.  |::.|         
Mouse   793 CESHLEKQSLFHVFNILEEDQKVLHR----PPFQVEKVARNLKGMAKKSLVPKVNDLHIMLRNQK 853

  Fly   182 -----------EPAEQDTSLKGPPKKAGRK-----SICSVCGEKFLSKEL--ADEHKSLVHVPSI 228
                       |.:||..:.:..|..:.:|     .|....|:.::.:.|  .:.:....|..|.
Mouse   854 KQMGVKLKSGAEVSEQHVTTRADPLASLKKPDFPEGIPHHSGKSYVKRWLQNINSYPDFEHRKSG 918

  Fly   229 PRYIC-NACNQTHHNQSDIRAHQLWHKLSK----------------------------------- 257
            |  :| |..:..::|::....:.|....||                                   
Mouse   919 P--LCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETGKSLVAKDN 981

  Fly   258 ----TPYKCPLCESSVANAYAFTRH----LREHT--PPTPVQLLVLDRECPLCKKTFVTNFFYNT 312
                ..:.|.....|:.::|..:.|    |.:.|  .|:....|.:::..|..|..:....|...
Mouse   982 GEELNKHHCESQNGSLYDSYLVSLHDNCTLSQTTINEPSTKSHLSIEKSRPEVKLVYQEMNFATK 1046

  Fly   313 HR---CAIRKRKCGGCSRTLNTEAAYMRHAPTCPKIYLNHSKH--------------IMPQVVTN 360
            .:   .||:....|.........|..:||...   ...|:.||              :.|.|:.|
Mouse  1047 RQSIEVAIQVDTMGENVLKDYLPALLLRHLEA---FVPNNQKHQNGISQIPGSLAEVVFPSVIDN 1108

  Fly   361 E------AQMLIKN---------EIEEELLGLPPATTVPPDFVIDEGMQPVVVLERL-------- 402
            .      |.:|:.|         :.:...:...|:.|.    .:.|.::.|.:.|..        
Mouse  1109 SSTNLLLAWLLVLNLKRTMNSFCQSDAHKMTNRPSETA----ALLEVLKHVAITEEADDLKAAVA 1169

  Fly   403 ----SSPLLRSSSGTDQ-----------LVAAKSKNSDRVSARNYLKRVDQLLKNTINTLV--SI 450
                |:.....|||.:|           |.:....|.:..:.:..|.....::.:..:.:|  |.
Mouse  1170 NLMESTKTCSGSSGREQDMLPVNCTASSLHSVDECNENGSAQKTLLDEGYSVMGDCTSEMVSKSC 1234

  Fly   451 KHEPEVH-INDTGPPRGQAESDPE---------PERNEEHPSFGDDIQAANDECQECQPETE--- 502
            ....|:| ::.|.||: |.:...:         ..:......|..|...:::.|.:.:...|   
Mouse  1235 NSSCEMHMVSKTNPPK-QVDDQSDGLLTSNSCTVSQRSTGACFLTDGVYSHEACAQKEGVYEGAC 1298

  Fly   503 -SDK--ISVAACDDIPSVSVKQEPEYDGYEKQTGVKQEPLKLKLKITKNHGKLNSSLIDDLDEAG 564
             ||:  |.:..|..|.||..|:....|..|     ..|.||...|:.|....|..|:..: |...
Mouse  1299 LSDETHIPIRDCHTIHSVHSKENKCTDDLE-----STEELKTVDKVPKGLSILADSMYKN-DSNV 1357

  Fly   565 QAFGRSSKKKKKRKHKEREKEASNETENCRTESQNQPAIKI--KQEPVDYAPEATVMTTIPMTQF 627
            ..|...:|...:|....:....|::..:...|.||.|..||  |::.:....|.:..:..|.: .
Mouse  1358 STFQNVNKLSSQRTLLSKTYLDSDKDYSPLEEFQNCPRKKIVNKKKSISSDKEESRTSEEPRS-I 1421

  Fly   628 ESSLNESERSEEVDEAMIQSQEDVKPNRMELDRMMQISNVTSGVDMAEEAMALERAEEACPEDSL 692
            .:|:..|||: .:.|  ::|.|:::.....:..|    ||              |||:...::::
Mouse  1422 TNSMTSSERN-AISE--LESFEELESQDTSIFNM----NV--------------RAEKKSTKETM 1465

  Fly   693 HKVKSVKSTARKST---GGAERKTYSPPRTNTLPQIVAVVSGESAFNMISIKPEPRNLGYGDEEP 754
            .|    :|.||.|:   ..:.||.....|.||      .:...:|...::    |.:|.:.   .
Mouse  1466 QK----QSEARMSSELINVSGRKIIEQERRNT------AILETTARGQVT----PPSLAFC---Y 1513

  Fly   755 EDQRETTEEINHNDMMEEEKEYIGSLD---LSDVSVKQERELDICEIDAVHRN--GLEKSD--ED 812
            :..:.|.:||:..:.....|:.:.|::   .|:.|:..::.         ||:  .|:.||  .|
Mouse  1514 DSNKNTEKEISEGETKMRVKKMVDSMENESYSESSLNFKKH---------HRSPGTLDWSDYGSD 1569

  Fly   813 DDDG----------NEDSASSADEAEEAMERDTEERIYREIEL--PP----------------LE 849
            .:.|          |:||....:.....::| ..|::|.:.|:  ||                :|
Mouse  1570 SESGYPCKASSNSHNDDSGQEKEPTRGIVKR-AIEKLYGKAEIIKPPFFHGSIHKSQVCPYNSVE 1633

  Fly   850 LQNESSRKDLESERM----DTEVS-TALPASETPSQTRDVLG-------VEK-SEASAFSLVIT- 900
            :|........|||..    ..:|| ::|...|.|....:.:|       :|. :::||...|.| 
Mouse  1634 VQCAKKTNFYESECQSLVSSEQVSRSSLIFQEFPQVDANGMGDSFGDSSIENVTKSSAHDRVFTE 1698

  Fly   901 --------------------NICSQAVPQPSAACSNDIECSIGPSPSTTNEPHSHTVENVQSPAN 945
                                .:.|........|.:..::..|  ..::...|:||..|....|..
Mouse  1699 KENGKLIDNGKWLLRENHLWRVSSDNPGMYGNADTTSVDTLI--DKNSIEVPYSHFGELAPGPTM 1761

  Fly   946 DLQTSAQVAIAAQSQPDPCIVSQPAASSESQADTKDLPPAASQIQTFNTESLPIHVHSETEDNSI 1010
            ...:|:::....|.....|........|:|:...:|.|.|  |.:|...|.:|.| |:|.:.|  
Mouse  1762 AELSSSEIEEMTQPLEVKCNYFNFPHGSDSEPFGEDFPDA--QNKTCPKEKIPNH-HTEEKGN-- 1821

  Fly  1011 ENDASYLESRAQVDCQSAGTENPSVVLEQNESLPSGSCVSPIPENPSPGNSPPQH--DESESLDK 1073
                 |...|.   |.|.   ..:.|...|:..|  .|...|...|.||::....  .|.:||||
Mouse  1822 -----YPSERL---CTSV---TQAFVSAGNKVHP--VCSDAIKTQPLPGSNITHGALQEGDSLDK 1873

  Fly  1074 PEMAAGSAYCLATVSLDAPKDTEALALPPCDAAIIDSNYTSDEEQQNVLNHEL----------SE 1128
            .....|....:.||.:. |.:.|:....          |..|.:.:|.|:.:|          |:
Mouse  1874 LYALCGQHCPILTVIIQ-PVNEESRGFA----------YRKDSDIENSLDFQLWMKIYPFMPQSK 1927

  Fly  1129 QQLAIMEHRQLLVHEE--------------QPALLEVIPPGLSS--------------------- 1158
            :.:...:.|.:.|.||              ..::::::....:|                     
Mouse  1928 KHVFRSDGRNVSVGEEFAGNVIGDLCDQLYFKSMIDLVDQRANSLGKEINLKKFQLYLKKSFSDP 1992

  Fly  1159 -------------------------RPIEETENRINEQQQDLEQGEERPPRFQANDDSNINEIAE 1198
                                     :.|:|..|.:|           |.|    |...|.|::..
Mouse  1993 LSTSLLVVENRNSVSLSPSSWTDNFKSIDENNNFLN-----------RLP----NSSKNPNQVVR 2042

  Fly  1199 NNNNANIEREL 1209
            .|.|.....||
Mouse  2043 ENTNFQFHLEL 2053

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1647NP_651636.1 zf-AD 19..95 CDD:214871 4/17 (24%)
C2H2 Zn finger 203..224 CDD:275368 2/22 (9%)
C2H2 Zn finger 233..253 CDD:275368 4/20 (20%)
C2H2 Zn finger 262..282 CDD:275368 5/23 (22%)
C2H2 Zn finger 297..314 CDD:275368 3/16 (19%)
Rp1NP_035413.1 Ubl1_cv_Nsp3_N-like 35..113 CDD:475130
DCX2_RP1 157..232 CDD:340667
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..379
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 643..688
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..887 5/23 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1400..1430 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1572..1595 4/22 (18%)
Blue background indicates that the domain is not in the aligned region.

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