DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1523 and AT4G11270

DIOPT Version :9

Sequence 1:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_001329550.1 Gene:AT4G11270 / 826729 AraportID:AT4G11270 Length:1446 Species:Arabidopsis thaliana


Alignment Length:534 Identity:101/534 - (18%)
Similarity:177/534 - (33%) Gaps:182/534 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 HTDSVNCI---KFFDE-------RLFATGSDDFTVALWDLRNMKQKLRVLHGHSNWVKNIEYSSK 144
            ||.||.|:   :.|.:       .:..:||.|.|:.:|||.: ...:.::|.|...|:.|..|..
plant   527 HTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIWDLES-GNVIMIMHHHVAPVRQIILSPA 590

  Fly   145 ------DKLLVSSGFDGSIFTWDINSQTEQGLISQRVF--HASGLMRCRISPTGDKLVLCTSGGY 201
                  .|..:|.|.|..:....:.:     |..:|:|  |.:       .||  |:|...:.||
plant   591 PTKRPWSKCFLSVGDDSCVALSSLET-----LRVERMFPGHPN-------YPT--KVVWDGTRGY 641

  Fly   202 IM--------------IIHHLDLTT-----------LHKDLCGFRPGIYR--------------- 226
            |.              :::..|:.|           .|.....|..||..               
plant   642 IACLFRSLSRKSDPIDVLYIWDVKTGARERVLHGAASHSMFDHFCAGISEKSHSGTVLNGNTSVS 706

  Fly   227 --LMQLGEQYIPQAAK-YDHVF-------SKRQKKNRVELVTDFPENNDAEMIMALQIHPHCCCM 281
              |..:.|:..|...| |:...       |..|:|.|       .|::.|...:....:|...| 
plant   707 SLLFPVDEERKPFYLKNYERAASLSTSKPSSSQEKTR-------EESSTASSFLQSIRYPSIKC- 763

  Fly   282 LTRNVSCDEQSEWTCIHDINEEPVRSEDEQD-EVEPQPKRKRVSTTLASRSSLNESQDQDTVGLT 345
                 :|......|.|.|::...|..:..:| ::....:.|....|...::|.::|..|.|    
plant   764 -----TCPFPGISTLIFDLSSLAVYCQTHEDSDMHKMLEEKSDKATAQQKTSKDKSPVQKT---- 819

  Fly   346 PRQARRPLRVSSVQVFQLDNSGAGRGASDNPSVLTRSDSFIPDIWAAEVTVQERAIRQNRARVSN 410
                             |||.                         |||...::||.:...|.|.
plant   820 -----------------LDNH-------------------------AEVVHMDKAIGEYLIRFSL 842

  Fly   411 N--HVSGYNF----------------VYAISSGV------LPLRQLGANS---LMGSSTSPRPLT 448
            :  |:.|.:|                .:.::||:      |.|...|.|:   |..||:....|.
plant   843 SFLHLWGIDFELDQMLVAHLKLKRPESFIVTSGLQGDKGSLTLAFPGLNATLELWKSSSEFTALR 907

  Fly   449 TPPPTESNQSSSSSSSSSSSSSSSSSS----NNSDTTVRLEIGNRLRLRSFNSPVTTPTFKENGH 509
            :.......|...|.|.|:::.||:.::    |.::....|:......|.:|        :::|..
plant   908 SVIMVSLAQCMISLSHSTATYSSNLAAFYTRNLAEKYPDLKPPLLQLLVTF--------WQDNSE 964

  Fly   510 SILVNAKKLLYYAA 523
            .:.:.|:.|.::.|
plant   965 QVRMAARSLFHHTA 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1523NP_651635.2 WD40 43..235 CDD:295369 41/204 (20%)
WD40 <45..>218 CDD:225201 36/170 (21%)
WD40 repeat 51..87 CDD:293791
WD40 repeat 95..129 CDD:293791 9/43 (21%)
WD40 repeat 136..174 CDD:293791 8/43 (19%)
WD40 repeat 181..210 CDD:293791 7/42 (17%)
AT4G11270NP_001329550.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4155
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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