DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1523 and wdr33

DIOPT Version :9

Sequence 1:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_001181857.1 Gene:wdr33 / 449009 ZFINID:ZDB-GENE-040924-3 Length:1102 Species:Danio rerio


Alignment Length:574 Identity:102/574 - (17%)
Similarity:179/574 - (31%) Gaps:178/574 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SDDNSLMRRIYSSMNMFNSYHANCWPTDAGRTGAIFNLEFNADGNVVVAATERKCVLVFDAIT-- 79
            :|....::...|:||....:.|:        ..||....|:...|.....::...|.::|.:.  
Zfish   179 ADHGGYVKYWQSNMNNVKMFQAH--------KEAIREASFSPTDNKFATCSDDGTVRIWDFLRCH 235

  Fly    80 QKEIF-------KVPDAH----------TDSVNCIKFFDERL----------------------- 104
            ::.|.       |..|.|          .||...|||:|.:.                       
Zfish   236 EERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG 300

  Fly   105 --FATGSDDFTVALWDLRNMKQKLRVLHGHSNWVKNIEYSS-KDKLLVSSGFDGSIFTWDINSQT 166
              ..|.|.|....|:|:||:|::|:|..||......:.:.. .:.:..|.|.|||:..|.:..:.
Zfish   301 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGMFASGGSDGSLLFWHVGVEK 365

  Fly   167 E--------QGLISQRVFHASGLMRC------------RISPTGDKLVLCTSGGYIMIIHHLDLT 211
            |        :|:|....:|..|.:.|            |..| |||:         ...::|:|.
Zfish   366 EVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRP-GDKM---------RDRYNLNLL 420

  Fly   212 TLHKDLCGFRPGIYRLMQLGEQY---------------IPQAAKYDHVFSKRQKKNRVELVTDFP 261
                      ||   :.:.|.:|               ||:..|    .:..|:::..::|.: |
Zfish   421 ----------PG---MSEDGVEYDDMDTNSIAAIPGMGIPEQLK----AAMEQEQSGKDMVAE-P 467

  Fly   262 ENN--------DAEMIMALQIHPHCCCMLTRNVSCDEQSEWTCIHDINEEPVRSEDEQDEVEPQP 318
            |.:        :..|:...:..|.......:.:....|..|.    .|:.||....|      .|
Zfish   468 EMSIPGLDWGMEEVMLRDQKKAPTKKVPYAKPIPAQFQQAWA----ENKVPVMPAGE------VP 522

  Fly   319 KRKRVSTTLASRSSLNESQDQDTVGLTPRQARRPLRVSSVQV---FQLDNSG----AGRGASDNP 376
            |.::....:.|:.......:|:...|   |...|:.:..:::   .||...|    .|:.:...|
Zfish   523 KERKDEKKVDSKKKTQAEIEQEMAAL---QYTNPMLLEQLKIERMAQLQEQGLPPPTGQQSGPVP 584

  Fly   377 SVLTRSDSFIPDIWAAEVTVQERAIRQNRARVSNNHVSGYNFVYAISSGVL-------------- 427
            |...:.....|.......::..:....|...|....:.|    ..|.||.:              
Zfish   585 SFPGQGGPMPPPAQGFPQSMPPQQTPHNMPPVGPGGMPG----PFIPSGQMGPPGPPMHQGPPPQ 645

  Fly   428 ----------------PLRQLGANSLMGSSTSPRPLTTPPPTESNQSSSSSSSS 465
                            |.|.:|.....|....||.:..|||...:..|.....|
Zfish   646 GMMGPPDMHGPPRHPGPHRNIGPQGPPGMPPGPRGMQGPPPGGMHPGSGGPPGS 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1523NP_651635.2 WD40 43..235 CDD:295369 51/271 (19%)
WD40 <45..>218 CDD:225201 47/237 (20%)
WD40 repeat 51..87 CDD:293791 7/44 (16%)
WD40 repeat 95..129 CDD:293791 13/58 (22%)
WD40 repeat 136..174 CDD:293791 9/46 (20%)
WD40 repeat 181..210 CDD:293791 7/40 (18%)
wdr33NP_001181857.1 WD40 121..>405 CDD:225201 45/233 (19%)
WD40 121..402 CDD:238121 45/230 (20%)
WD40 repeat 122..159 CDD:293791
WD40 repeat 165..200 CDD:293791 4/20 (20%)
WD40 repeat 205..241 CDD:293791 6/35 (17%)
WD40 repeat 248..285 CDD:293791 9/36 (25%)
WD40 repeat 291..328 CDD:293791 10/36 (28%)
WD40 repeat 336..371 CDD:293791 7/34 (21%)
WD40 repeat 378..402 CDD:293791 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.