DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1523 and Dcaf10

DIOPT Version :9

Sequence 1:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_001101405.1 Gene:Dcaf10 / 313242 RGDID:1304730 Length:563 Species:Rattus norvegicus


Alignment Length:653 Identity:174/653 - (26%)
Similarity:251/653 - (38%) Gaps:259/653 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ERYLSRRESGFHIHRSDDNSLMRRIYSSM-NMFNSYHANCWPTD----AGRT-GAIFNLEFNADG 60
            ||.|.|   |..:..:.||      :.:| |::.|.|    |.|    :.|| ||:||||::.||
  Rat   133 ERSLGR---GLFVDPARDN------FRTMTNLYGSIH----PADSVYLSTRTHGAVFNLEYSPDG 184

  Fly    61 NVVVAATERKCVLVFDAITQKEIFKVPDAHTDSVNCIKFFDERLFATGSDDFTVALWDLRNMKQK 125
            :|:..|.|:..||:||.|:.|.|..:.:||.|.||.|:|.|.|||||.|||.|:||||||.:..|
  Rat   185 SVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLRKLNTK 249

  Fly   126 LRVLHGHSNWVKNIEYSSKDKLLVSSGFDGSIFTWDINSQTEQGLISQRVFHASGLMRCRISPTG 190
            :..||||::|||||||.:..:|||:|||||::..||.|..||.|...::.||...|||.|::|..
  Rat   250 VCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDGCPHKKFFHTRFLMRMRLTPDC 314

  Fly   191 DKLVLCTSGGYIMIIHHLDL----------------TTLHKDL------CGFR----PGIYRLMQ 229
            .|:::.||.||::|:|.|||                ||...||      .|.|    |..:....
  Rat   315 SKMLISTSSGYLLILHDLDLTKSLEVGSYPILRARRTTSSSDLTTSSSSSGSRVSGSPCHHNDSN 379

  Fly   230 LGEQYIPQAAKYDHVFSKRQKKNRVELVT-DFP-ENNDAEMIMALQIHPHCCCMLTRNVSCDEQS 292
            ..|:::.:|::.:.|    ..:|.:|::| :.| |.:....|.:||:||.....|.|..|..:..
  Rat   380 STEKHVSRASQREGV----SPRNSLEVLTPEVPGERDRGNCITSLQLHPKGWATLLRCSSNTDDQ 440

  Fly   293 EWTCIHDINE-EPVRSEDEQDEVEPQPKRKRVSTTLASRSSLNESQDQDTVGLTPRQARRPLRVS 356
            ||||:::..| .|||      .|.|             |.||                       
  Rat   441 EWTCVYEFQEGAPVR------PVSP-------------RCSL----------------------- 463

  Fly   357 SVQVFQLDNSGAGRGASDNPSVLTRSDSFIPDIWAAEVTVQERAIRQNRARVSNNHVSGYNFVYA 421
                                                                             
  Rat   464 ----------------------------------------------------------------- 463

  Fly   422 ISSGVLPLRQLGANSLMGSSTSPRPLTTPPPTESNQSSSSSSSSSSSSSSSSSSNNSDTTVRLEI 486
                                                                             
  Rat   464 ----------------------------------------------------------------- 463

  Fly   487 GNRLRLRSFNSPVTTPTFKENGHSILVNAKKLLYYAAETNTKPGFIKEPGFSADGRVVCSPYGNG 551
                                          :|.:|..|.|...|:|||..||.|||::.||:|.|
  Rat   464 ------------------------------RLTHYIEEANVGRGYIKELCFSPDGRMISSPHGYG 498

  Fly   552 VRLFGYSEDCCDYPKCQAFEEVKSKPRKLVELAKITEHQDVVLCAKFSPREPLLVTGCNGGEVTW 616
            :||.|:.:.|.:...|...|   :.|.:::.  .:..|.||||..||||....:.:||..|.|:.
  Rat   499 IRLLGFDKQCSELVDCLPKE---ASPLRVIR--SLYSHNDVVLTTKFSPTHCQIASGCLSGRVSL 558

  Fly   617 YRP 619
            |:|
  Rat   559 YQP 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1523NP_651635.2 WD40 43..235 CDD:295369 95/222 (43%)
WD40 <45..>218 CDD:225201 90/195 (46%)
WD40 repeat 51..87 CDD:293791 16/35 (46%)
WD40 repeat 95..129 CDD:293791 20/33 (61%)
WD40 repeat 136..174 CDD:293791 20/37 (54%)
WD40 repeat 181..210 CDD:293791 13/28 (46%)
Dcaf10NP_001101405.1 WD40 <168..323 CDD:421866 78/154 (51%)
WD40 repeat 176..211 CDD:293791 16/34 (47%)
WD40 repeat 218..254 CDD:293791 21/35 (60%)
WD40 repeat 260..286 CDD:293791 15/25 (60%)
WD40 521..559 CDD:197651 14/39 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334833
Domainoid 1 1.000 141 1.000 Domainoid score I4608
eggNOG 1 0.900 - - E1_KOG4155
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 277 1.000 Inparanoid score I2863
OMA 1 1.010 - - QHG49939
OrthoDB 1 1.010 - - D1068414at2759
OrthoFinder 1 1.000 - - FOG0007319
OrthoInspector 1 1.000 - - oto98166
orthoMCL 1 0.900 - - OOG6_107950
Panther 1 1.100 - - LDO PTHR14588
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5430
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

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