DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1523 and Taf5

DIOPT Version :9

Sequence 1:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_796316.2 Gene:Taf5 / 226182 MGIID:2442144 Length:801 Species:Mus musculus


Alignment Length:215 Identity:47/215 - (21%)
Similarity:81/215 - (37%) Gaps:51/215 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GRTGAIFNLEFNADGNVVVAATER-----------KCVL--------VFD--------------- 76
            |.:|.::...|:.|.|.:::::|.           .|::        |:|               
Mouse   542 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 606

  Fly    77 -------AITQKEIFKVPDAHTDSVNCIKFF-DERLFATGSDDFTVALWDLRNMKQKLRVLHGHS 133
                   |....:..::...|...|||.:|. :....||||.|.||.|||:.| ...:|:..||.
Mouse   607 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN-GNCVRIFTGHK 670

  Fly   134 NWVKNIEYSSKDKLLVSSGFDGSIFTWDINSQTEQGL-ISQRVFHASGLMRCRISPTGDKLVLCT 197
            ..:.::.:|...:.|.:...||.:..|||.    .|| :.:...|...:...|.|..|:   :..
Mouse   671 GPIHSLTFSPNGRFLATGATDGRVLLWDIG----HGLMVGELKGHTDTVCSLRFSRDGE---ILA 728

  Fly   198 SGGYIMIIHHLDLTTLHKDL 217
            ||.....:...|.....:||
Mouse   729 SGSMDNTVRLWDAVKAFEDL 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1523NP_651635.2 WD40 43..235 CDD:295369 47/215 (22%)
WD40 <45..>218 CDD:225201 47/215 (22%)
WD40 repeat 51..87 CDD:293791 8/76 (11%)
WD40 repeat 95..129 CDD:293791 15/34 (44%)
WD40 repeat 136..174 CDD:293791 9/38 (24%)
WD40 repeat 181..210 CDD:293791 5/28 (18%)
Taf5NP_796316.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..176
TAF5_NTD2 212..344 CDD:176269
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..438
WD40 <460..741 CDD:225201 44/206 (21%)
WD 1 469..508
WD40 473..743 CDD:238121 45/208 (22%)
WD40 repeat 474..542 CDD:293791 47/215 (22%)
WD 2 542..581 7/38 (18%)
WD40 repeat 548..584 CDD:293791 5/35 (14%)
WD 3 584..625 3/40 (8%)
WD40 repeat 589..625 CDD:293791 3/35 (9%)
WD 4 626..667 17/41 (41%)
WD40 repeat 632..667 CDD:293791 15/35 (43%)
WD 5 668..707 11/42 (26%)
WD40 repeat 673..709 CDD:293791 9/39 (23%)
WD 6 710..749 9/42 (21%)
WD40 repeat 715..757 CDD:293791 8/37 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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