Protein Alignment Prp39 and PRP39

DIOPT Version :10

• Sequence 1: NP_733256.2
• Gene: Prp39 / 43399
• FlyBaseID: FBgn0039600
• Length: 1066
• Species: Drosophila melanogaster
• Sequence 2: NP_001184905.1
• Gene: PRP39 / 839314
• AraportID: AT1G04080
• Length: 823
• Species: Arabidopsis thaliana
• Alignment Length: 970
• Identity: 223/970 - (22%)
• Similarity: 359/970 - (37%)
• Gaps: 273/970 - (28%)

  Fly   180 MNSSEDSSSQHAIAEDLADADTSNATIVNTEIVSEDELPLPSKPEINDAEEVSDEELPAPQRAEL 244
            |..||...|:...:....|.:.|.||:.:|   .::..|      |.||..
plant     1 MGDSEAMVSEGYTSAPYGDYNASAATVEST---GQETAP------IVDASH-------------- 42

  Fly   245 PEDAEVISEDELPASNNNNTATEPKAPLKRKAENESVKSTEDKDASSHESSTKDKSSEQYNPGSP 309
                          |.||::.....||::..:..::|..|                       :|
plant    43 --------------SVNNDSLVNGTAPVENGSATDNVAVT-----------------------AP 70

  Fly   310 TSESNDAQPSEKKLKVEESEPKEKKKEKERDKDKEKDKDKDNNKDKEKERKKLPDLDKYWRAVKE 374
            .:|..|...|  .|..||                                      ::.|..|:.
plant    71 AAEHGDNTGS--TLSTEE--------------------------------------ERLWNIVRA 95

  Fly   375 DSTDFTGWTYLLQYVDN--ESDAEAAREAYDTFLSHYPYCYGYWRKYADYEKRKGIKANCYKVFE 437
            :|.:|..||.|:...:.  :.:....|:.||.||:.:|.|||||:|:||:|.|.|......:|:|
plant    96 NSLEFNAWTALIDETERIAQDNIAKIRKVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYE 160

  Fly   438 RGLEAIPLSVDLWIHYLMHVKSNHGDDETFVRSQYERAVKACGLEFRSDKLWDAYIRWENESKRY 502
            |.:..:..|||:|:||.....:.:||.|| :|..:|||:...|.:|.|..|||.||.:|...:.:
plant   161 RAVLGVTYSVDIWLHYCTFAINTYGDPET-IRRLFERALVYVGTDFLSSPLWDKYIEYEYMQQDW 224

  Fly   503 HRVVQIYDRLLAIPTQGYNGHFDNFQDLINQHDVTITLANEEVIRLRKDFHERQQSKSSKSSSKH 567
            .||..||.|:|..|.|..:.:|.:|::|.....::...:.||               |:.::...
plant   225 SRVALIYTRILENPIQNLDRYFSSFKELAETRPLSELRSAEE---------------SAAAAVAV 274

  Fly   568 RRDSSSSSKDKDSKEREREKDKDKDKDKDKEKRETVGGGVGKSPKDTSETQVDESDSTTDLTTES 632
            ..|:|.|:..:..             :|..|.|..|.|...:|||       .||.|:|:  .|.
plant   275 AGDASESAASESG-------------EKADEGRSQVDGSTEQSPK-------LESASSTE--PEE 317

  Fly   633 ESSHAASKPAMQIDFSDLSTLNDEEVVSIRDRAISARRKVHKLTVSAVTARWSFEEGIKRPYFHV 697
            ...:...:.||.|...:.    :.:::                         .:|..|:||||||
plant   318 LKKYVGIREAMYIKSKEF----ESKII-------------------------GYEMAIRRPYFHV 353

  Fly   698 KPLERAQLKNWKDYLDFEIEKGDRER--------------------------------------- 723
            :||..|:|:||.:||||....||..:
plant   354 RPLNVAELENWHNYLDFIERDGDFNKLSSIWCIICLIGFPLDQATFKWEITETKACASICSNVIN 418

  Fly   724 ----------------VLVLFERCLIACALYDEFWLKMLRYLESLEDQSGVVDLVRDVYRRACRI 772
                            |:.|:|||::.||.|.|:|   :||:.::| .||..||..:...||.::
plant   419 AGVFLTFCLSGKEGPSVVKLYERCVVTCANYPEYW---IRYVTNME-ASGSADLAENALARATQV 479

  Fly   773 HHPDKPSLHLMWAAFEECQMNFDDAAEILQRI-DQRCPNLLQLSYRRINVERRRGALDKCRELYK 836
            ....:|.:||..|..:|...:...|....|.: .:..|.||:...:..|:|.|.|.||....||:
plant   480 FVKKQPEIHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSLYE 544

  Fly   837 HYIESTKNK---GIAGSLAIKYARFLNKICHDLDAGLAALQQALERDPANTRVALQMIDLCLQRP 898
            ..|...|.|   .|...|..:|:||...:..|.:.....:.:||:....:..:...:|.....:|
plant   545 QVIAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALIHFEAIQP 609

  Fly   899 KVDEQEVVEIMDKFMARADIEPDQKVLFAQRK------VEFLEDFG--STARGLQDAQRALQQAL 955
            ...|.:.:|.:.:.:.:.|.:........:|:      :|||..||  .:.:..:|....|....
plant   610 PPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKKAEDQHVKLFYPH 674

  Fly   956 TKAKEAQKKSDG---SPSRKNSSSSKEGPVPTGSAAAAYNN------GGSAAAVAGYNYGAA--- 1008
            ....|.:|:|..   :..|...:.:..|..|....:.||.|      ||.||....:....|
plant   675 RSTSELKKRSADDFLASDRTKMAKTYNGTPPAQPVSNAYPNAQAQWSGGYAAQPQTWPPAQAAPA 739

  Fly  1009 -----NPYYGQQNTAAAY------------PSQTPQQASYDSY----YNQWGYGSGGASA 1047
                 ||.||||....||            |:..||.|:|.:|    |....|....|:|
plant   740 QPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGAYPAQTYPTQSYAPPVAAA 799

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prp39	NP_733256.2	PHA03169	11..>269	CDD:223003	16/88 (18%)
		RNA14	359..>535	CDD:227438	61/177 (34%)
		Spy	755..>962	CDD:443119	49/218 (22%)
		TPR repeat	884..915	CDD:276808	4/30 (13%)
PRP39	NP_001184905.1	RNA14	60..>249	CDD:227438	68/252 (27%)
		Suf	<186..>315	CDD:428647	45/166 (27%)
		PEP_TPR_lipo	<464..>596	CDD:274350	34/131 (26%)