DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdn and ZNF34

DIOPT Version :9

Sequence 1:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_085057.3 Gene:ZNF34 / 80778 HGNCID:13098 Length:560 Species:Homo sapiens


Alignment Length:372 Identity:112/372 - (30%)
Similarity:154/372 - (41%) Gaps:80/372 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 KVFKEEPPEEKHPPEQV--VTKVEVCESELL----PPSFTIFQQAKSAESVAD--AASMPPPAAS 256
            :.|.||.|:...|.|..  ::|.|....:|:    |.:.|:.....|.||..:  ..|.|.|   
Human   129 ETFGEEDPQGSEPVEACDHISKSEGSLEKLVEQRGPRAVTLTNGESSRESGGNLRLLSRPVP--- 190

  Fly   257 ETKPLEVDPAPLHKCLDCNGLLLETPDEVAKHEAAAHRLRLT----------------------- 298
                   |..| |||..|. ...|....:..|: ..||.:.|                       
Human   191 -------DQRP-HKCDICE-QSFEQRSYLNNHK-RVHRSKKTNTVRNSGEIFSANLVVKEDQKIP 245

  Fly   299 -----YRCSECQREFELLAGLKKHLKTHRTEGRKDTWKKCPDCGKCLKLGSMWM-HRKIHSDNKK 357
                 :.||.|.:.|...|.|.||.:.| ||.:.   .||.:|||.......:: ||::||....
Human   246 TGKKLHYCSYCGKTFRYSANLVKHQRLH-TEEKP---YKCDECGKAFSQSCEFINHRRMHSGEIP 306

  Fly   358 YQCDICGQKFVQKINLTHHARIHSSEKPYECPECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKM 422
            |:||.||:.|.::.||..|.|||:.||||:|.||.|.|...|.|..||:.|...:.|:|..|||.
Human   307 YRCDECGKTFTRRPNLMKHQRIHTGEKPYKCGECGKHFSAYSSLIYHQRIHTGEKPYKCNDCGKA 371

  Fly   423 YKTERCLKVHNLVHLEQRPFACTVCDKSFISNSKLKQHSNIHTGMRPFKCNYCPRDFTNFPNWLK 487
            :.....|..|...|..::||.|..|.|.|..:|.|.||..||||.:|:|||.|.:.|......::
Human   372 FSDGSILIRHRRTHTGEKPFECKECGKGFTQSSNLIQHQRIHTGEKPYKCNECEKAFIQKTKLVE 436

  Fly   488 HTRRR-------------------HKVDHK---TGEHLENIPSYCSK 512
            |.|..                   |.:.|:   |||.    |..||:
Human   437 HQRSHTGEKPYECNDCGKVFSQSTHLIQHQRIHTGEK----PYKCSE 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdnNP_476900.1 C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
RPB9 333..425 CDD:224510 39/92 (42%)
C2H2 Zn finger 333..352 CDD:275368 6/19 (32%)
zf-H2C2_2 344..369 CDD:290200 10/25 (40%)
zf-C2H2 358..380 CDD:278523 10/21 (48%)
C2H2 Zn finger 360..380 CDD:275368 9/19 (47%)
zf-H2C2_2 372..395 CDD:290200 14/22 (64%)
zf-C2H2 386..408 CDD:278523 10/21 (48%)
C2H2 Zn finger 388..436 CDD:275368 17/47 (36%)
zf-H2C2_2 400..425 CDD:290200 9/24 (38%)
C2H2 Zn finger 416..433 CDD:275368 5/16 (31%)
zf-H2C2_2 429..453 CDD:290200 9/23 (39%)
C2H2 Zn finger 444..464 CDD:275368 8/19 (42%)
zf-H2C2_2 457..481 CDD:290200 13/23 (57%)
C2H2 Zn finger 472..493 CDD:275368 6/39 (15%)
ZNF34NP_085057.3 KRAB 35..97 CDD:214630
KRAB 35..74 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..188 6/24 (25%)
COG5048 188..554 CDD:227381 97/313 (31%)
C2H2 Zn finger 197..217 CDD:275368 4/21 (19%)
zf-C2H2 251..273 CDD:278523 8/21 (38%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
zf-H2C2_2 265..290 CDD:290200 11/28 (39%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
zf-C2H2 307..329 CDD:278523 10/21 (48%)
C2H2 Zn finger 309..329 CDD:275368 9/19 (47%)
zf-H2C2_2 321..345 CDD:290200 14/23 (61%)
C2H2 Zn finger 337..357 CDD:275368 9/19 (47%)
zf-H2C2_2 349..373 CDD:290200 9/23 (39%)
C2H2 Zn finger 365..385 CDD:275368 6/19 (32%)
zf-H2C2_2 378..402 CDD:290200 9/23 (39%)
C2H2 Zn finger 393..413 CDD:275368 8/19 (42%)
zf-H2C2_2 405..430 CDD:290200 13/24 (54%)
C2H2 Zn finger 421..441 CDD:275368 6/19 (32%)
zf-H2C2_2 434..458 CDD:290200 2/23 (9%)
C2H2 Zn finger 449..469 CDD:275368 2/19 (11%)
zf-H2C2_2 461..486 CDD:290200 8/23 (35%)
C2H2 Zn finger 477..497 CDD:275368 2/3 (67%)
zf-H2C2_2 493..514 CDD:290200
C2H2 Zn finger 505..525 CDD:275368
zf-H2C2_2 517..542 CDD:290200
C2H2 Zn finger 533..553 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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