DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdn and ZNF28

DIOPT Version :9

Sequence 1:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_008900.3 Gene:ZNF28 / 7576 HGNCID:13073 Length:718 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdnNP_476900.1 C2H2 Zn finger 301..321 CDD:275368
RPB9 333..425 CDD:224510
C2H2 Zn finger 333..352 CDD:275368
zf-H2C2_2 344..369 CDD:290200
zf-C2H2 358..380 CDD:278523
C2H2 Zn finger 360..380 CDD:275368
zf-H2C2_2 372..395 CDD:290200
zf-C2H2 386..408 CDD:278523
C2H2 Zn finger 388..436 CDD:275368
zf-H2C2_2 400..425 CDD:290200
C2H2 Zn finger 416..433 CDD:275368
zf-H2C2_2 429..453 CDD:290200
C2H2 Zn finger 444..464 CDD:275368
zf-H2C2_2 457..481 CDD:290200
C2H2 Zn finger 472..493 CDD:275368
ZNF28NP_008900.3 KRAB 8..>48 CDD:214630
KRAB 8..47 CDD:279668
COG5048 <143..373 CDD:227381
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368
COG5048 267..655 CDD:227381
C2H2 Zn finger 273..293 CDD:275368
C2H2 Zn finger 301..321 CDD:275368
C2H2 Zn finger 329..349 CDD:275368
zf-H2C2_2 341..366 CDD:290200
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 370..394 CDD:290200
C2H2 Zn finger 385..405 CDD:275368
zf-H2C2_2 397..422 CDD:290200
C2H2 Zn finger 413..433 CDD:275368
zf-H2C2_2 425..450 CDD:290200
C2H2 Zn finger 441..461 CDD:275368
C2H2 Zn finger 469..489 CDD:275368
zf-H2C2_2 481..506 CDD:290200
C2H2 Zn finger 497..517 CDD:275368
zf-H2C2_2 510..534 CDD:290200
C2H2 Zn finger 525..545 CDD:275368
C2H2 Zn finger 553..573 CDD:275368
zf-H2C2_2 565..590 CDD:290200
C2H2 Zn finger 581..601 CDD:275368
zf-H2C2_2 593..618 CDD:290200
C2H2 Zn finger 609..629 CDD:275368
zf-H2C2_2 621..646 CDD:290200
C2H2 Zn finger 637..657 CDD:275368
C2H2 Zn finger 665..685 CDD:275368
zf-H2C2_2 677..702 CDD:290200
C2H2 Zn finger 693..713 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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