DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdn and ZNF350

DIOPT Version :10

Sequence 1:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster
Sequence 2:XP_016882583.1 Gene:ZNF350 / 59348 HGNCID:16656 Length:574 Species:Homo sapiens


Alignment Length:467 Identity:124/467 - (26%)
Similarity:191/467 - (40%) Gaps:80/467 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 RPEPPNAFTNSPFKK-TSSSGTSTPVKLSPEQLHQQHQLQMPQSQLLQRKPKLPAATAVRLKVFK 203
            :|.||.      ||: ...|.|..|. |:.:.....|.|:..||:.|               |.:
Human    99 QPPPPG------FKRFLCLSPTPAPY-LAHDIWKVDHVLERLQSESL---------------VNR 141

  Fly   204 EEPPEEKHPPEQVV--TKVEV----------CESELLPPSFTIFQQAK----------------- 239
            .:|..|....|.:|  :|.:.          ...:.|..:.|:..|:|                 
Human   142 RKPCHEHDAFENIVHCSKSQFLLGQNHDIFDLRGKSLKSNLTLVNQSKGYEIKNSVEFTGNGDSF 206

  Fly   240 ----------------SAESVADAASMPPPAASETKPLEVDPAPLHKCLDCNGLLLETPDEVAKH 288
                            |.:.::..:....|...:|:.||..    |.|.:|....:: ...:..|
Human   207 LHANHERLHTAIKFPASQKLISTKSQFISPKHQKTRKLEKH----HVCSECGKAFIK-KSWLTDH 266

  Fly   289 EAAAHRLRLTYRCSECQREFELLAGLKKHLKTHRTEGRKDTWKKCPDCGKC-LKLGSMWMHRKIH 352
            : ..|.....:|||.|::.|.....|.:|.:||  .|.|.  .:||:|||. ||...:.:|:|.|
Human   267 Q-VMHTGEKPHRCSLCEKAFSRKFMLTEHQRTH--TGEKP--YECPECGKAFLKKSRLNIHQKTH 326

  Fly   353 SDNKKYQCDICGQKFVQKINLTHHARIHSSEKPYECPECQKRFQERSHLQRHQKYHAQTRSYRCE 417
            :..|.|.|..||:.|:||.||..|.|||:.||||.|.||.|.|.:::.|..||::|.....:.|.
Human   327 TGEKPYICSECGKGFIQKGNLIVHQRIHTGEKPYICNECGKGFIQKTCLIAHQRFHTGKTPFVCS 391

  Fly   418 KCGKMYKTERCLKVHNLVHLEQRPFACTVCDKSFISNSKLKQHSNIHTGMRPFKCNYCPRDFTNF 482
            :|||....:..|..|..:|..::||.|:.|.|:|.:..||..|...|||.||:.||.|.:.|...
Human   392 ECGKSCSQKSGLIKHQRIHTGEKPFECSECGKAFSTKQKLIVHQRTHTGERPYGCNECGKAFAYM 456

  Fly   483 PNWLKHTRRRHKVDHKTGEHLENIPSYCSKKSTTNKAQKAAAAAAAAAAASSAVNPNELSASSEL 547
            ...:|| :|.|..:.:....:||.|:.......|:...:...:|..|.....:|.|......|.|
Human   457 SCLVKH-KRIHTREKQEAAKVENPPAERHSSLHTSDVMQEKNSANGATTQVPSVAPQTSLNISGL 520

  Fly   548 KAKANLTSTAAP 559
            .|..|:.....|
Human   521 LANRNVVLVGQP 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdnNP_476900.1 zf-C2HE <279..321 CDD:465082 9/41 (22%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
C2H2 Zn finger 333..352 CDD:275368 9/19 (47%)
zf-C2H2 358..380 CDD:395048 11/21 (52%)
C2H2 Zn finger 360..380 CDD:275368 10/19 (53%)
zf-H2C2_2 376..395 CDD:463886 12/18 (67%)
zf-C2H2 386..408 CDD:395048 9/21 (43%)
C2H2 Zn finger 388..436 CDD:275368 15/47 (32%)
zf-H2C2_2 400..425 CDD:463886 8/24 (33%)
C2H2 Zn finger 416..433 CDD:275368 5/16 (31%)
SUF4-like 440..>507 CDD:411020 24/66 (36%)
C2H2 Zn finger 444..465 CDD:411020 7/20 (35%)
C2H2 Zn finger 444..464 CDD:275368 7/19 (37%)
zf-H2C2_2 457..481 CDD:463886 11/23 (48%)
C2H2 Zn finger 472..493 CDD:411020 7/20 (35%)
C2H2 Zn finger 472..493 CDD:275368 7/20 (35%)
ZNF350XP_016882583.1 KRAB 9..68 CDD:214630
COG5048 <202..464 CDD:227381 85/272 (31%)
C2H2 Zn finger 250..270 CDD:275368 3/21 (14%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 9/19 (47%)
C2H2 Zn finger 334..354 CDD:275368 10/19 (53%)
C2H2 Zn finger 362..382 CDD:275368 8/19 (42%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 7/19 (37%)
C2H2 Zn finger 446..466 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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