DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdn and PRDM10

DIOPT Version :10

Sequence 1:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_064613.2 Gene:PRDM10 / 56980 HGNCID:13995 Length:1160 Species:Homo sapiens


Alignment Length:933 Identity:203/933 - (21%)
Similarity:319/933 - (34%) Gaps:255/933 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 KDESLDIDLSACVTISSASLVNGNSLSSTDFWRVLDESAQNNTELNL--------------SSDV 107
            |:..|..||  ...:|..:|.|         |.:....|||:.|.||              .:..
Human   263 KERDLHEDL--WFELSDETLCN---------WMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVE 316

  Fly   108 CRDDLAATSSSTVPSTLTSDNHSSSEFSVTFLRPEPPN---AFTNSPFKKTSSSGTSTPVKLSPE 169
            .:.:|....:::....:....|..||.....||.:..|   ...|..|             :|.|
Human   317 PKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRF-------------ISSE 368

  Fly   170 QLHQQHQLQMPQSQL-------------------LQRKPKLPAATAVRLKVFKEEPPEEKHPPEQ 215
            || ||| |.....:|                   ..|:|..| ...:||::..|...:.....:.
Human   369 QL-QQH-LNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRP-PKFIRLEITSENGEKSDDGTQD 430

  Fly   216 VV---TKVEVCESELLPPSFTIFQQAKSAESVADAASMPPPAAS------ETKPLEVDPAPLHKC 271
            ::   ||.:..|:|  |.:.....|.:  ::......:|....|      ||..|.:.|......
Human   431 LLHFPTKEQFDEAE--PATLNGLDQPE--QTTIPIPQLPQETQSSLEHEPETHTLHLQPQHEESV 491

  Fly   272 LDCNGLLLETPDEVAKHEAAAHRLRL-----------------TYRCSECQREFELLAGLKKHLK 319
            :.....|  |.|::.:    |.|:||                 .::|.:|.:.|.....|.:||:
Human   492 VPTQSTL--TADDMRR----AKRIRLELQNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLR 550

  Fly   320 THRTEGRKDTWKKCP-DCGKC----LKLGSMWMHRKIHSDNKKYQCDICGQKFVQKINLTHHARI 379
            .|..||      .|| .|..|    :...|:..|.|:|||.|.|.|..|.:.|.:...|..|..|
Human   551 FHGREG------NCPLTCDLCNKGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAI 609

  Fly   380 HSSEKPYECPECQKRFQERSHLQRH-QKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFA 443
            |.::..:.||.|:|||.:...:::| :.:|:: :.|:|.:|.|.:.....|::|.|.|.:::.|.
Human   610 HINDGYFTCPTCKKRFPDFIQVKKHVRSFHSE-KIYQCTECDKAFCRPDKLRLHMLRHSDRKDFL 673

  Fly   444 CTVCDKSFISNSKLKQH-SNIHTGMR--------------------------PFKCNYCPRDFTN 481
            |:.|.|.|....||::| ..:|...|                          .|||..|...|..
Human   674 CSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRR 738

  Fly   482 FPNWLKHTRRRHKVDHKTGEHLENIP---------------SYCSKKSTTNKAQKA-------AA 524
            ....:.|..:||. |.|    :|.:|               .||.|...:...:||       .|
Human   739 RGMLVNHLSKRHP-DMK----IEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGA 798

  Fly   525 AAAAAAAASSAVNPNELSASSELKAKANLTSTAAPAP------AKQAR---------KKKQPQQA 574
            ....:........|.|  ....|.....||.|.|..|      :||..         :||.|:.|
Human   799 ELPPSIRKLRPAGPGE--PDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFA 861

  Fly   575 TLAALGITLPAGTALQQVHPVPLAQQH---QQELTTVLVPLAPPAPKQT--------KAKRERKQ 628
            .|:.. |..|..||:....|..|....   :..:||.|:..|.....||        :...:|.|
Human   862 QLSNT-IHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQ 925

  Fly   629 LAPKQLQ----QKPQLLQ-----------QGQPQQSSL------EPIPAVPQ--IKKEPVQTQGP 670
            ..|....    |:||.:|           ..|.|||::      :|.| .||  |:.:.:|...|
Human   926 YIPVSQSASGLQQPQHIQLQVVQVASATSPHQSQQSTVDVGQLHDPQP-YPQHAIQVQHIQVSEP 989

  Fly   671 FLDLHGLSLTSAEELIMEQALEMEECGLYDAPNA-NTEMGTSDNAISDSAA----ALHFQIKNEL 730
            .......:..|.:.|               :|:| ..:.|.|.:.|..|::    ||..|.:.:.
Human   990 TASAPSSAQVSGQPL---------------SPSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQ 1039

  Fly   731 PDELLPDDDFLPCK------PSDRLPCPSLESSPFSSPASMELTAVSCASSVAISTNALPVRSGN 789
            ...:  ...:||..      .|..:...:|....|....|...|.|:.....|::       ||:
Human  1040 NSSV--QHTYLPSAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVT-------SGH 1095

  Fly   790 YYLPAFTLNAHGK-LSSTGNGVQ 811
            |.|.........| .|:...|||
Human  1096 YVLSESQSELEEKQTSALSGGVQ 1118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdnNP_476900.1 zf-C2HE <279..321 CDD:465082 12/58 (21%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
C2H2 Zn finger 333..352 CDD:275368 7/23 (30%)
zf-C2H2 358..380 CDD:395048 6/21 (29%)
C2H2 Zn finger 360..380 CDD:275368 5/19 (26%)
zf-H2C2_2 376..395 CDD:463886 7/18 (39%)
zf-C2H2 386..408 CDD:395048 7/22 (32%)
C2H2 Zn finger 388..436 CDD:275368 15/48 (31%)
zf-H2C2_2 400..425 CDD:463886 6/25 (24%)
C2H2 Zn finger 416..433 CDD:275368 4/16 (25%)
SUF4-like 440..>507 CDD:411020 21/93 (23%)
C2H2 Zn finger 444..465 CDD:411020 7/21 (33%)
C2H2 Zn finger 444..464 CDD:275368 7/20 (35%)
zf-H2C2_2 457..481 CDD:463886 9/50 (18%)
C2H2 Zn finger 472..493 CDD:411020 4/20 (20%)
C2H2 Zn finger 472..493 CDD:275368 4/20 (20%)
PRDM10NP_064613.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..168
zf_PR_Knuckle <173..200 CDD:375871
PR-SET_PRDM10 203..334 CDD:380971 15/81 (19%)
N-terminal PR domain, essential for transcriptional activator activity. /evidence=ECO:0000250|UniProtKB:Q3UTQ7 227..331 15/78 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..412 3/25 (12%)
Tristanin_u2 405..510 CDD:465211 22/115 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..499 6/34 (18%)
C2H2 Zn finger 532..552 CDD:275368 6/19 (32%)
COG5048 <559..692 CDD:227381 42/133 (32%)
C2H2 Zn finger 562..582 CDD:275368 5/19 (26%)
C2H2 Zn finger 590..610 CDD:275368 5/19 (26%)
C2H2 Zn finger 618..638 CDD:275368 7/19 (37%)
zf-C2H2 644..666 CDD:395048 7/21 (33%)
C2H2 Zn finger 646..666 CDD:275368 6/19 (32%)
C2H2 Zn finger 674..695 CDD:275368 7/20 (35%)
C2H2 Zn finger 729..755 CDD:275368 8/30 (27%)
C2H2 Zn finger 774..791 CDD:275368 5/16 (31%)
SP1-4_N <844..>1018 CDD:425404 41/190 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 953..973 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1001..1044 10/59 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1101..1160 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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