DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdn and CG31388

DIOPT Version :9

Sequence 1:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster


Alignment Length:567 Identity:122/567 - (21%)
Similarity:187/567 - (32%) Gaps:188/567 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RMKEEAPSKKLPPKIYGGDAGTPTKAAHDEILSSLLR-INNFDSISSIKDESL--------DIDL 65
            ||.:.|.:|.|                .|...||:|| |....::...:|..|        ..||
  Fly    10 RMADPAVAKNL----------------FDPSSSSVLRQIETLTNLQLKEDGKLPRFMCQDCQHDL 58

  Fly    66 SACVTISSASLVNGNSLSSTDFWRVLDESAQNNTELNLSS----------------DVCRDDLAA 114
            ...:                ||.||..| ||...||.|..                |.|.|:|  
  Fly    59 QIAI----------------DFRRVCIE-AQELLELQLRQVEKEEEAFESLAEQWLDDCPDEL-- 104

  Fly   115 TSSSTVPSTLTSDNHSSSEFSVTFLRPEPPNAFTNSPFKKTSSSGTSTPVKLSPEQLHQQHQLQM 179
               |.:...|..::.....|.     |||.:..|:    :.:|..|:|    :.|.::....:..
  Fly   105 ---SNLSPVLQLNDRMDFIFD-----PEPQDKNTD----ELASIKTTT----TTEYMNAYQSVAS 153

  Fly   180 PQSQLLQRKPKLPAATAVRLKVFKEEPPEEKHPPEQVVTKVEVCESELLPPSFTIFQQAKSAESV 244
            |||     .|:|..                              :|:|....|.:          
  Fly   154 PQS-----SPELST------------------------------DSQLSNEHFDM---------- 173

  Fly   245 ADAASMPPPAASETKPLE-VDPAPLHKCLDCNGLLLETPDEVAKHEAAAHRL--RLTYRCSECQR 306
                .:.|.:..|::.:: .|.:..|.|..| ||..|..||:..|:...|.:  ...:.|..|..
  Fly   174 ----GLSPESEPESEAIDNRDTSSSHTCSKC-GLEFENVDELKLHKYHLHDIPPDTKFVCDHCDE 233

  Fly   307 EFELLAGLKKHLK------THRTEGRKDTWKKCPDCGKCLKLGSMWMHRKIHSDNKK-------- 357
            .|...|.|.:|..      ||             .|.||    ....|..|..:..|        
  Fly   234 GFRSAAALTRHCNMINLPLTH-------------SCTKC----KSQFHNHILLETHKQRCLRPPA 281

  Fly   358 --YQCDICGQKFVQKINLTHHARIHSSEKPYECPECQKRFQERSHLQRHQKYHAQTRSYRCE-KC 419
              :.|.|||:......||.:|...|:..:.::|.:|...|...:.|..|||.|...|.|.|. .|
  Fly   282 SQHVCHICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTAAELCSHQKTHTTERPYICRYNC 346

  Fly   420 GKMYKTERCLKVHNLVHLE--QRPFACTVCDKSFISNSKLKQHSNIHTGMRPFKCNYCPRDFTNF 482
            ||.::......:|..||::  :|.:.|..|.||:::.|:.:.|...|...|...|..|       
  Fly   347 GKTFRFCSARSMHERVHMDASKRIYQCEYCPKSYVTPSECRTHQKYHNLTRDHGCEIC------- 404

  Fly   483 PNWLKHTRRRHKVDHKTGEHLENIPSYCSKKSTTNKAQKAAAAAAAA 529
                       ::..||.:|..:     ..||..:|..:|.|.|||:
  Fly   405 -----------RISFKTAKHYRS-----HLKSNAHKTLEARAKAAAS 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdnNP_476900.1 C2H2 Zn finger 301..321 CDD:275368 6/25 (24%)
RPB9 333..425 CDD:224510 28/102 (27%)
C2H2 Zn finger 333..352 CDD:275368 4/18 (22%)
zf-H2C2_2 344..369 CDD:290200 7/34 (21%)
zf-C2H2 358..380 CDD:278523 7/21 (33%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
zf-H2C2_2 372..395 CDD:290200 6/22 (27%)
zf-C2H2 386..408 CDD:278523 7/21 (33%)
C2H2 Zn finger 388..436 CDD:275368 15/48 (31%)
zf-H2C2_2 400..425 CDD:290200 11/25 (44%)
C2H2 Zn finger 416..433 CDD:275368 4/17 (24%)
zf-H2C2_2 429..453 CDD:290200 8/25 (32%)
C2H2 Zn finger 444..464 CDD:275368 6/19 (32%)
zf-H2C2_2 457..481 CDD:290200 5/23 (22%)
C2H2 Zn finger 472..493 CDD:275368 2/20 (10%)
CG31388NP_650060.1 zf-AD 4..76 CDD:285071 22/98 (22%)
C2H2 Zn finger 228..254 CDD:275368 6/25 (24%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 7/19 (37%)
C2H2 Zn finger 342..363 CDD:275368 5/20 (25%)
C2H2 Zn finger 373..393 CDD:275368 6/19 (32%)
C2H2 Zn finger 401..419 CDD:275368 5/40 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4021
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.950

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