DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdn and CG1529

DIOPT Version :9

Sequence 1:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_001138223.2 Gene:CG1529 / 33077 FlyBaseID:FBgn0031144 Length:512 Species:Drosophila melanogaster


Alignment Length:516 Identity:111/516 - (21%)
Similarity:171/516 - (33%) Gaps:158/516 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 ETPDEVAK--HEAAAHRLRLTYRCSECQREFEL---LAGLKKHLKTHRTEGRKDTWKK------- 332
            |.|||..|  ||...|.|...:......::.:|   ....||.|.....|...|.::.       
  Fly    95 EPPDEGLKENHEENEHELEEEHEKQADGQQVDLSKKQEDQKKILDDREDEEYPDEYENSQQQLSQ 159

  Fly   333 -----------CPDCGK-CLKLGSMWMH-RKIHSD-NKKYQCDICGQKFVQKINLTHHAR----- 378
                       |..||| ..||..:..| |.:|.. :|.:.|..|.:.|.:...|..|.|     
  Fly   160 GTGSKRRAGLACDQCGKQVYKLPYLEAHIRSVHQGYSKPFLCRSCDKSFTRYEQLRSHMRNAHPQ 224

  Fly   379 ---IHSSEKPYECPECQKRFQERSHLQRHQKYHAQTRSYRCEKCG--KMYKTERC--LKVHNLVH 436
               :....:...|..|.:::..::.|..|.|.|||.:.:.||.||  |:.:||..  |:.||   
  Fly   225 LEQLQQELRDLICELCNRQYSTKNALGEHLKRHAQRKEHVCEHCGVAKVTRTELLTHLRTHN--- 286

  Fly   437 LEQRP----FACTVCDKSFISNSKLKQHSN-IHTGMRPFKCNYCPRDFTNFPNWLKHTRRRHKVD 496
                |    |.|..|.:.|...|.:.:|.. :|.|.|.|:|.:|.:.|....:.::| .|.|...
  Fly   287 ----PTWERFKCEQCPQLFRHKSAISRHVRVVHEGQRRFQCGHCEKKFGTHASQVRH-ERLHTES 346

  Fly   497 HKTGEHLENIP---SYCSKKSTT----------NKAQKAAAAAAAAAAASSAVNPNELSASSELK 548
            ..:||..|..|   .:|.|...:          ::|:|........:..|.         ..|.:
  Fly   347 TGSGEAAEEWPFACIHCQKPCVSRQTLELHLRRHRARKTHRKRREHSRESQ---------EQEQE 402

  Fly   549 AKANLTSTAAPAPAKQARKKKQPQQATLAALGITLPAGTALQQVHPVPLAQQHQQELTTVLVPLA 613
            ...:....|..|...|.||.::.:|..|:                    .:.|:.|:|       
  Fly   403 HDRDQEQGAREAQQDQLRKGEKLRQRDLS--------------------RESHRNEVT------- 440

  Fly   614 PPAPKQTKAKRERKQLAPKQLQQKPQLLQQGQPQQSSLEPIPAVPQIKKEPVQTQGPFLDLHGLS 678
                              .|..|:|...|||   |.|.:|.|       :|              
  Fly   441 ------------------MQTSQRPNECQQG---QESYDPEP-------DP-------------- 463

  Fly   679 LTSAEELIMEQALEMEECGL--YDAPNANTEMGTSDNAISDSAAAL--HFQIKNELPDELL 735
                        ||..:|.|  .||.:...:.....:|.|..:|.|  ||.....:|.:.|
  Fly   464 ------------LEASQCKLEQEDALDPEWQHKIEQDAESQDSARLEGHFHDYKPIPSKAL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdnNP_476900.1 C2H2 Zn finger 301..321 CDD:275368 4/22 (18%)
RPB9 333..425 CDD:224510 29/104 (28%)
C2H2 Zn finger 333..352 CDD:275368 8/20 (40%)
zf-H2C2_2 344..369 CDD:290200 7/26 (27%)
zf-C2H2 358..380 CDD:278523 6/29 (21%)
C2H2 Zn finger 360..380 CDD:275368 6/27 (22%)
zf-H2C2_2 372..395 CDD:290200 5/30 (17%)
zf-C2H2 386..408 CDD:278523 5/21 (24%)
C2H2 Zn finger 388..436 CDD:275368 18/51 (35%)
zf-H2C2_2 400..425 CDD:290200 11/26 (42%)
C2H2 Zn finger 416..433 CDD:275368 8/20 (40%)
zf-H2C2_2 429..453 CDD:290200 8/27 (30%)
C2H2 Zn finger 444..464 CDD:275368 5/20 (25%)
zf-H2C2_2 457..481 CDD:290200 8/24 (33%)
C2H2 Zn finger 472..493 CDD:275368 5/20 (25%)
CG1529NP_001138223.2 zf-AD 11..79 CDD:285071
C2H2 Zn finger 171..192 CDD:275368 8/20 (40%)
zf-C2H2_2 201..>257 CDD:289522 11/55 (20%)
C2H2 Zn finger 201..222 CDD:275368 6/20 (30%)
C2H2 Zn finger 237..257 CDD:275368 5/19 (26%)
C2H2 Zn finger 265..285 CDD:275368 8/19 (42%)
zf-C2H2_8 268..349 CDD:292531 25/88 (28%)
C2H2 Zn finger 294..315 CDD:275368 5/20 (25%)
C2H2 Zn finger 323..343 CDD:275368 5/20 (25%)
C2H2 Zn finger 360..380 CDD:275368 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457170
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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