DRSC/TRiP Functional Genomics Resources

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Protein Alignment wdn and CG42726

DIOPT Version :9

Sequence 1:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_732017.3 Gene:CG42726 / 318709 FlyBaseID:FBgn0261679 Length:441 Species:Drosophila melanogaster


Alignment Length:455 Identity:109/455 - (23%)
Similarity:175/455 - (38%) Gaps:107/455 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 APLHKCLDC---NGLLLETPDEVAKHEAAAHRLRLT---YRCSECQREFELLAGLKKHLKTHRTE 324
            |.:..||:|   ..:.::...|.....:|..|:.:|   |.|:.|.::|........||    |.
  Fly    33 ADVSDCLECRVARSVDIQETQETQARTSADKRIIVTDKGYHCTVCNKDFRSRTQQYYHL----TC 93

  Fly   325 GRKDTWKK--CPDCGKCLKLGS-MWMHRKIHSDNKKYQCDICGQKFVQKINLTHHARIHSSEKPY 386
            | .|..||  |.:||:.....| :..|...|....|:.|.:|.:.|.|.|.|..|...|:.|| :
  Fly    94 G-NDLLKKFNCKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQRHMLTHNQEK-H 156

  Fly   387 ECPECQKRFQERSHLQRHQKYHAQT-RSYRCEKCGKMYKTERCLKVH-------NLVHLEQRPFA 443
            .||.|||.|:.:|.|..|...|:.. ..::||.|.|.::.:..|..|       |:.|:      
  Fly   157 LCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANLNQHLRKHDKNNIRHM------ 215

  Fly   444 CTVCDKSFISNSKLKQHSNIHTGMRPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTGEHLENIPS 508
            |.||.|||:..:.|:.|...|:......|:.|.:.: |.|:.|    .||...|||.|....|  
  Fly   216 CKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKSY-NDPDAL----GRHLRQHKTAERYRCI-- 273

  Fly   509 YC----SKKSTTNKAQKAAAAAAAAAAASSAVNPNELSASSELKAKANLTSTAAPAPAKQARKKK 569
            .|    ::|....:..::.....|.|:....|.|         ::.|...:||...|::..|   
  Fly   274 QCDITINRKDNMLRHLRSMHPGCAFASTVEMVTP---------RSSAQEATTAEERPSQTVR--- 326

  Fly   570 QPQQATLAALGITLPAGTALQQVHPVPLAQQHQQELTTVLVPLAPPAPKQ-TKAKRERKQLAPKQ 633
              ..:.:.::|          .|.||.|.|             :.|.|.| .:.:.|:.:..|:.
  Fly   327 --YNSVIQSVG----------NVEPVMLLQ-------------STPLPSQLPELQMEKGKAVPEH 366

  Fly   634 L-------QQKPQLLQQ-----------GQPQQSSLEPI-----PAVPQIKKEPVQTQGPFLDLH 675
            |       ::..||.::           .:|...:.||.     |.||.      |....|.::|
  Fly   367 LPLPDVMPEENVQLYRKIILDLDNEEYSSEPSPDAQEPAMQHHQPRVPG------QGSSKFSEMH 425

  Fly   676  675
              Fly   426  425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdnNP_476900.1 C2H2 Zn finger 301..321 CDD:275368 5/19 (26%)
RPB9 333..425 CDD:224510 31/93 (33%)
C2H2 Zn finger 333..352 CDD:275368 5/19 (26%)
zf-H2C2_2 344..369 CDD:290200 7/25 (28%)
zf-C2H2 358..380 CDD:278523 7/21 (33%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
zf-H2C2_2 372..395 CDD:290200 10/22 (45%)
zf-C2H2 386..408 CDD:278523 9/21 (43%)
C2H2 Zn finger 388..436 CDD:275368 17/55 (31%)
zf-H2C2_2 400..425 CDD:290200 7/25 (28%)
C2H2 Zn finger 416..433 CDD:275368 6/23 (26%)
zf-H2C2_2 429..453 CDD:290200 10/30 (33%)
C2H2 Zn finger 444..464 CDD:275368 8/19 (42%)
zf-H2C2_2 457..481 CDD:290200 5/23 (22%)
C2H2 Zn finger 472..493 CDD:275368 5/20 (25%)
CG42726NP_732017.3 C2H2 Zn finger 74..94 CDD:275368 6/23 (26%)
C2H2 Zn finger 103..123 CDD:275368 5/19 (26%)
COG5048 <112..288 CDD:227381 55/189 (29%)
C2H2 Zn finger 131..151 CDD:275368 7/19 (37%)
Chordopox_A33R 151..>254 CDD:283591 33/110 (30%)
C2H2 Zn finger 158..178 CDD:275368 9/19 (47%)
C2H2 Zn finger 187..207 CDD:275368 6/19 (32%)
C2H2 Zn finger 216..236 CDD:275368 8/19 (42%)
C2H2 Zn finger 244..264 CDD:275368 7/24 (29%)
C2H2 Zn finger 272..290 CDD:275368 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457198
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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