DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wdn and LOC101883356

DIOPT Version :10

Sequence 1:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster
Sequence 2:NP_001429543.1 Gene:LOC101883356 / 101883356 -ID:- Length:309 Species:Danio rerio


Alignment Length:269 Identity:89/269 - (33%)
Similarity:136/269 - (50%) Gaps:25/269 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 YRCSECQREFELLAGLKKHLKTHRTEGRKDTWKKCPDCGKCL-KLGSMWMHRKIHSDNKKYQCDI 362
            :.|.:|.:.|...:.||||.|||  .|.|.  ..|.:|||.. :|.|...|:|.|.|.:.::|..
Zfish    27 HSCRQCGKSFRRKSKLKKHRKTH--AGEKP--YTCTECGKSFSQLDSYKQHQKTHEDKRDHECLQ 87

  Fly   363 CGQKFVQKINLTHHARIHSSEKPYECPECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKMYKTER 427
            ||:.|....:|..|.|||:.||||:|..|:|.|:...||:.|::.|...:.|.|.:|||.:|.:.
Zfish    88 CGKSFTTAGHLKIHQRIHTGEKPYKCSYCEKSFRHSGHLKSHERIHTGEKPYHCTQCGKSFKDKS 152

  Fly   428 CLKVHNLVHLEQRPFACTVCDKSFISNSKLKQHSNIHTGMRPFKCNYCPRDFTNFPNWLKHTRRR 492
            .|..|.|||..::||.||.|...|.|::.||||..|||..:|:.|.:|.:.|:...:.     ::
Zfish   153 GLTYHLLVHTGEKPFTCTQCGHDFRSSTILKQHMRIHTNEKPYACLFCKKRFSRLGDC-----KQ 212

  Fly   493 HKVDHKTGEHLENIPSYCSKKSTTNKAQKAAAAAAAAAAASSAVNPNE-------LSASSELKAK 550
            |:..| |||. :::...|.|..||      |.:........:...|::       .|.||:||:.
Zfish   213 HQKTH-TGER-DHVCLECGKSFTT------AGSMKRHQRIHTGEKPHKCSYCEKSFSRSSQLKSH 269

  Fly   551 ANLTSTAAP 559
            ..:.:...|
Zfish   270 ERIHTGEKP 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdnNP_476900.1 zf-C2HE <279..321 CDD:465082 8/21 (38%)
C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
C2H2 Zn finger 333..352 CDD:275368 8/19 (42%)
zf-C2H2 358..380 CDD:395048 7/21 (33%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
zf-H2C2_2 376..395 CDD:463886 11/18 (61%)
zf-C2H2 386..408 CDD:395048 8/21 (38%)
C2H2 Zn finger 388..436 CDD:275368 17/47 (36%)
zf-H2C2_2 400..425 CDD:463886 9/24 (38%)
C2H2 Zn finger 416..433 CDD:275368 6/16 (38%)
SUF4-like 440..>507 CDD:411020 23/66 (35%)
C2H2 Zn finger 444..465 CDD:411020 10/20 (50%)
C2H2 Zn finger 444..464 CDD:275368 9/19 (47%)
zf-H2C2_2 457..481 CDD:463886 11/23 (48%)
C2H2 Zn finger 472..493 CDD:411020 3/20 (15%)
C2H2 Zn finger 472..493 CDD:275368 3/20 (15%)
LOC101883356NP_001429543.1 None

Return to query results.
Submit another query.