DRSC/TRiP Functional Genomics Resources

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Protein Alignment intr and CG34290

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_001097899.2 Gene:CG34290 / 5740609 FlyBaseID:FBgn0085319 Length:282 Species:Drosophila melanogaster


Alignment Length:234 Identity:48/234 - (20%)
Similarity:89/234 - (38%) Gaps:58/234 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 TDGQATTEAPKAV-------KHFVMRILYENKVICSGALISTRLVLTSALCFPR----------- 132
            |.|.:|::.|..|       ::....:.|::  .|.|:|||.|.:|::|.|..|           
  Fly    42 TVGSSTSKYPFMVSLQDVITRNTTNGVSYQH--FCGGSLISDRWILSAAHCVWRKNIHYIAAFIG 104

  Fly   133 -----TLRQPPPRSYKLQASRSRIYSVANLITGAIEDMALLLLHAPLEDPFVHPIDLCESP---L 189
                 .:.|..|  |.|::.....:..:|.    ..|:|||.:.......|.:.:...:.|   :
  Fly   105 YENIENIGQLQP--YGLESVEYIYFQPSNF----RNDIALLYMKRRYWSDFGNGLQYAQLPPHGM 163

  Fly   190 RRNDNVTMYM-----------SQQHLRFLRTKLIPNSNCK----RSYAQDENAFITQTMLCALNS 239
            :.:.|.:..:           .|:.|.....::|.|..|:    ..:|....|    ..:|||.:
  Fly   164 KPDQNESCRIIGYGATHHAGPCQKRLFEAEVRVIDNQKCRDIIGHIWAPQNGA----NTVCALGN 224

  Fly   240 NRLVDCQTAKGDVLL----HQDRLCGVDIYGQHCSDGGV 274
            |: ..||...|..|:    .:|.:.|:..:|..|...|:
  Fly   225 NQ-DSCQGDSGGPLICTYGGKDYIYGLVSHGLTCGIPGM 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 42/201 (21%)
CG34290NP_001097899.2 Tryp_SPc 34..277 CDD:238113 48/234 (21%)

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