DRSC/TRiP Functional Genomics Resources

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Protein Alignment intr and Prss53

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_006230384.1 Gene:Prss53 / 499270 RGDID:1566127 Length:591 Species:Rattus norvegicus


Alignment Length:205 Identity:49/205 - (23%)
Similarity:80/205 - (39%) Gaps:38/205 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 RILYENKVICSGALISTRLVLTSALCF--PRTLRQ------PPPRSYKLQASRSRIYSVANLITG 160
            |:.:..|:.|.|||:|..:|||:|.||  .:||.:      ..|..:.|:..         ::.|
  Rat   356 RLKHHGKLACGGALVSEVVVLTAAHCFIGRQTLEEWSVGLGAGPEEWGLKQL---------ILHG 411

  Fly   161 AI------EDMALLLLHAPLE-DPFVHPIDLCESPLRRND-------NVTMYMSQQHLRFLRTKL 211
            |.      .|:|.|||..|:. .|.:.|:.|..:..|..|       .:|......|...:...:
  Rat   412 AYTHPEGGHDVAFLLLAQPVTLGPGLRPLCLPYADHRLPDGEHGWVLGLTREAGINHPHTVPVTV 476

  Fly   212 IPNSNCKRSYAQDENAF--ITQTMLCALNSNRLVDCQTAKGDVLLHQDR----LCGVDIYGQHCS 270
            :....|.|.:|...:..  |...|:|.........|:...|..|:|:.|    |.|:..:|..| 
  Rat   477 LGPMACSRQHAASGSTGVPILPGMICTTVVGEPPHCEGLSGAPLVHEIRGTWFLAGLHSFGDTC- 540

  Fly   271 DGGVNGELYA 280
            .|.....::|
  Rat   541 QGSAKPAVFA 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 47/197 (24%)
Prss53XP_006230384.1 Tryp_SPc 45..310 CDD:238113
Tryp_SPc 341..561 CDD:238113 49/205 (24%)
Blue background indicates that the domain is not in the aligned region.

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