DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment intr and Prss36

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_038942639.1 Gene:Prss36 / 497040 RGDID:1593186 Length:874 Species:Rattus norvegicus


Alignment Length:204 Identity:49/204 - (24%)
Similarity:79/204 - (38%) Gaps:53/204 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 ICSGALISTRLVLTSALCFPRTLRQPPPRSYK-----------LQASRSRIYSVANLIT------ 159
            ||.|:||:...||::|.||.......|...:.           |:.:..|  |||.::.      
  Rat    83 ICGGSLIAPSWVLSAAHCFVTNGTLEPADEWSVLLGVHSQDGPLEGAHMR--SVATILVPDNYSR 145

  Fly   160 ---GAIEDMALLLLHAPLE-DPFVHPIDLCES----------------PLRRNDNVTMYMSQQHL 204
               ||  |:|||.|.:|.: .|.|.|:.|..:                .::.:|.:.:....|.:
  Rat   146 VELGA--DLALLRLASPAKLGPSVKPVCLPRASHLFAHGTACWATGWGDVQESDPLPVPWVLQEV 208

  Fly   205 RFLRTKLIPNSNCKRSYAQDENAFIT----QTMLCA-LNSNRLVDCQTAKGDVLLHQDR----LC 260
            ..   ||:..:.|:..|::.....:|    ..|||| ....|...||...|..|:.:|.    |.
  Rat   209 EL---KLLGETACQCLYSRPGPFNLTLQLLPGMLCAGYPEGRRDTCQGDSGGPLVCEDGGRWFLA 270

  Fly   261 GVDIYGQHC 269
            |:..:|..|
  Rat   271 GITSFGFGC 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 49/204 (24%)
Prss36XP_038942639.1 Tryp_SPc 59..301 CDD:238113 49/204 (24%)
Tryp_SPc 338..532 CDD:473915
Tryp_SPc 607..802 CDD:473915
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.