DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment intr and CG34130

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_001036759.1 Gene:CG34130 / 4379866 FlyBaseID:FBgn0083966 Length:297 Species:Drosophila melanogaster


Alignment Length:261 Identity:60/261 - (22%)
Similarity:109/261 - (41%) Gaps:36/261 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 KISARFSSGGNKEPNSLEIIPAEIETLLTDGQATTEAPKAVKHFVMRILYENKVICSGALISTRL 122
            ::.|..||..|...:.|...| .:.||..:|...|....||. :::||:.....:|..:.:|...
  Fly    16 EVGAAHSSWWNSSASYLHGRP-PVRTLNKNGIRRTSGGHAVP-WLLRIVDGPTFVCGASYLSALY 78

  Fly   123 VLTSALCFPRTLRQPPPRSYKLQASRSRIYS-----------VANLIT-------GAIEDMALLL 169
            .||||.|......|....|.:|.:|.||..:           :.|:|.       |...|:|::.
  Fly    79 ALTSANCMHSHRSQMESLSVELVSSDSRQDNQLDSHDPPNALIRNIIVSKDWHWPGTFMDVAVIE 143

  Fly   170 LHAPLEDPFVHPIDLCESPLR--RNDNVTMYMS--QQHLRFLRTKLIPNSNCKRSYAQDENAFIT 230
            |...|.....:.:.||.:||.  ::.:|..|.:  .:::|....:::....|..:|.   |..:.
  Fly   144 LTNRLRGNRNNYVTLCTNPLSSYKSLSVVSYGAGPAENVRTEEIEVLNRMICDSAYG---NFLLR 205

  Fly   231 QTMLCALNSNRLVDCQTAKGDVLLHQDRLCGVDIYGQHCSDGGVNGELYADVFKARTELMHLIER 295
            :|:.||....|..||..:.|..:...|:|||:..:...|....:.| ::.|:        |.::|
  Fly   206 ETVACAKEFKRSADCMFSAGCPVTAGDQLCGIVAWSPACKRSNLPG-IFTDI--------HQVKR 261

  Fly   296 Y 296
            :
  Fly   262 F 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 44/193 (23%)
CG34130NP_001036759.1 Trypsin 53..263 CDD:459667 50/223 (22%)

Return to query results.
Submit another query.