DRSC/TRiP Functional Genomics Resources

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Protein Alignment intr and CG16998

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_648134.1 Gene:CG16998 / 38847 FlyBaseID:FBgn0035795 Length:258 Species:Drosophila melanogaster


Alignment Length:233 Identity:57/233 - (24%)
Similarity:91/233 - (39%) Gaps:46/233 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 EAPKAVKHFVMRILYENKVICSGALISTRLVLTSALCFPRTLRQPPPRSYKLQA---------SR 148
            |.|..:..::..|.......||.|||::..::|:..|...      |.||.::|         .|
  Fly    30 EVPIHLTPWLASITVHGNYSCSSALITSLWLVTAGHCVQY------PDSYSVRAGSTFTDGGGQR 88

  Fly   149 SRIYSVA-----NLITGAIE-DMALLLLHAPLEDPFV--HPIDLCESPLRR-------------- 191
            ..:.||.     ||.|  :| |:|||    .|:..|.  ..|.:.:.||..              
  Fly    89 RNVVSVILHPDFNLRT--LENDIALL----KLDKSFTLGGNIQVVKLPLPSLNILPRTLLVAGWG 147

  Fly   192 NDNVTMYMSQQHLRFLRTKLIPNSNCKRSYAQDENAFITQTMLCALNSNRLVDCQTAKGDVLLHQ 256
            |.:.|...|:..||....|:|....|:|.|:..... ||..|:||..:.| ..|....|..|:|:
  Fly   148 NPDATDSESEPRLRGTVVKVINQRLCQRLYSHLHRP-ITDDMVCAAGAGR-DHCYGDSGAPLVHR 210

  Fly   257 DRLCGVDIYGQHCSDGGVNGELYADVFKARTELMHLIE 294
            ....|:..:...|:|....| :|..:....|.:.:::|
  Fly   211 GSSYGIVSFAHGCADPHFPG-VYTRLANYVTWIFNVLE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 52/202 (26%)
CG16998NP_648134.1 Tryp_SPc 24..242 CDD:214473 56/226 (25%)

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