DRSC/TRiP Functional Genomics Resources

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Protein Alignment intr and CG3650

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_611971.1 Gene:CG3650 / 37974 FlyBaseID:FBgn0035070 Length:249 Species:Drosophila melanogaster


Alignment Length:254 Identity:55/254 - (21%)
Similarity:108/254 - (42%) Gaps:51/254 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LEIIPAEIETLLTDGQATTEAPKAVKHFVMRILYENKVICSGALISTRLVLTSALCFPRTLRQPP 138
            |.:...:|:..:..|..||.:  ||..||:.:.|:....|.|:|:::..|:|:|.|.        
  Fly    15 LGLASGQIQPRIVGGTTTTLS--AVGGFVVNLRYDGTFYCGGSLVTSSHVVTAAHCL-------- 69

  Fly   139 PRSYKLQASRSRIYSVANLI--TGAIE------------------DMALLLLHAPLEDPFVHPID 183
             :.|  ||||..:....:.:  :|.:.                  |:.::.|.:.|....:..|.
  Fly    70 -KGY--QASRITVQGGVSKLSQSGVVRRVARYFIPNGFSSSSLNWDVGVIRLQSALTGSGITTIP 131

  Fly   184 LCESPLRRNDNVTMYMS------------QQHLRFLRTKLIPNSNCKRSYAQDENAFITQTMLCA 236
            ||:  ::.|....|.:|            ...||.:|.:||....|:|:|...:.  :|.:..||
  Fly   132 LCQ--VQWNPGNYMRVSGWGTTRYGNSSPSNQLRTVRIQLIRKKVCQRAYQGRDT--LTASTFCA 192

  Fly   237 LNSNRLVDCQTAKGDVLLHQDRLCGVDIYGQHCSDGGVNGELYADVFKARTELMHLIER 295
            ....: ..|....|..::.:::|||:..:|..|::....| :|..|.:.|:.::..|::
  Fly   193 RTGGK-DSCSGDSGGGVIFKNQLCGIVSWGLGCANAQYPG-VYTSVHRVRSFILRSIKK 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 43/203 (21%)
CG3650NP_611971.1 Tryp_SPc 25..243 CDD:214473 52/236 (22%)

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