DRSC/TRiP Functional Genomics Resources

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Protein Alignment intr and CG17571

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_610109.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster


Alignment Length:264 Identity:61/264 - (23%)
Similarity:99/264 - (37%) Gaps:67/264 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 SPKISARFSSGGNKEPNSLEIIPAEIETLLTDGQATTEAPKAVKHFVMRILYENKVICSGALIST 120
            :|.:...|....|.|...:|..|.::....|.|          .||           |.|:||.:
  Fly    21 NPGLDFPFGRIVNGEDVDIENYPYQVSVQTTKG----------SHF-----------CGGSLIDS 64

  Fly   121 RLVLTSALCFPRTLRQPPPRSYKLQASRSRIYSVANLITG------------------AIEDMAL 167
            ..|||:|.|.         :||.....:.|:.|.:....|                  .|.|:|:
  Fly    65 ETVLTAAHCM---------QSYAASELQVRVGSTSRSSGGEVVTVRAFKYHEGYNSKLMINDVAI 120

  Fly   168 LLLHAPL-EDPFVHPIDLCESPLRRNDN-------VTMYM---SQQHLRFLRTKLIPNSNCKR-- 219
            :.|.:|: :...:..|:|.:|......|       .|.::   |...|:.:...|:...:|..  
  Fly   121 IKLSSPVRQTSKIRAIELADSEAVSGTNAVVSGWGTTCFLFCSSPDTLQKVEVDLLHYKDCAADT 185

  Fly   220 -SYAQDENAFITQTMLCALNSNRLVDCQTAKGDVLLHQDRLCGVDIYGQHCSDGGVNGELYADVF 283
             :|..|.   |.:||:||....:.. ||...|..|:..::|.||..:|..|:..|..| :||||.
  Fly   186 YNYGSDS---ILETMVCATGEKKDA-CQGDSGGPLVADNKLVGVVSWGSGCAWTGYPG-VYADVA 245

  Fly   284 KART 287
            ..|:
  Fly   246 SLRS 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 50/203 (25%)
CG17571NP_610109.1 Tryp_SPc 30..251 CDD:214473 59/255 (23%)

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