DRSC/TRiP Functional Genomics Resources

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Protein Alignment intr and Send1

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:282 Identity:56/282 - (19%)
Similarity:102/282 - (36%) Gaps:83/282 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VIEYIVPYPYQRSPKISARFSSGGNKEPNSLEIIPAEIETLLTDGQATTEAPKAVKHFVMRILYE 108
            :|..:||...:.|.:|     .||    :|::|               |:.|..|.     :.|.
  Fly    15 LISPVVPVLLEPSERI-----IGG----SSMDI---------------TDVPWQVS-----LQYY 50

  Fly   109 NKVICSGALISTRLVLTSALCF---PRTLRQPPPRSYKLQASRSRIYSVANLITGAIE------- 163
            .:..|.|::.|..:::|:|.|.   .|::|           :.|.::....::.| :|       
  Fly    51 GEHFCGGSIYSKTIIITAAHCIKEGERSIR-----------AGSSLHDSGGVVVG-VEAYIIHPQ 103

  Fly   164 --------DMALLLLHAPLE-DPFVHPIDLCES--PLRRNDNVT------MYMSQQHLRFLRTKL 211
                    |:|:|.|.:||. ...:..|.|.|:  |...:...|      ..:..:.|:.:...:
  Fly   104 FDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPPTSSSALATGWGRGNFLIRPRQLQGVEILI 168

  Fly   212 IPNSNCKRSYAQDENAFITQTMLCALNSNRLVDCQTAKGDVLLHQDRLCGVDIYGQHCSDGG--- 273
            .|...||..|.   |....:. :||....: ..|....|..|:...:|.|:      .|..|   
  Fly   169 RPLIVCKLKYG---NGVFNED-ICAGRMGK-GGCYGDSGGPLVFNGQLVGI------TSRTGNIV 222

  Fly   274 -VNGELYADVFKARTELMHLIE 294
             :...|||.|.:.|..::..|:
  Fly   223 CLGSSLYASVARYRNWILSAID 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 41/202 (20%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 51/261 (20%)

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