DRSC/TRiP Functional Genomics Resources

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Protein Alignment intr and Ser6

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster


Alignment Length:209 Identity:48/209 - (22%)
Similarity:82/209 - (39%) Gaps:56/209 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 CSGALISTRLVLTSALCFP-----RTLRQPPPRSYKLQASRSRIYS------VANLIT-----GA 161
            |.|::::...:||:|.|..     ..:.......:.::|..:..:|      ||.:|.     ..
  Fly    57 CGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNF 121

  Fly   162 IEDMALLLLHAPL-EDPFVHPIDL--CESPLRRNDNVTMYMS-----------QQHLRFLRTKLI 212
            :.|:|||.|.:|| ....:.||||  .::|.    :|.:.:|           .::|::...|.|
  Fly   122 LNDVALLRLESPLILSASIQPIDLPTVDTPA----DVDVVISGWGRIKHQGDLPRYLQYNTLKSI 182

  Fly   213 PNSNCKRSYAQDENAFITQTMLCALNSNRLVD---CQTAKGDVLLHQDRLCG-----VDIYGQHC 269
            ....|     ::...|..:..||.|:.   ||   |....|...::.::|.|     ||..|...
  Fly   183 TRQQC-----EELIDFGFEGELCLLHQ---VDNGACNGDSGGPAVYNNQLVGVAGFVVDGCGSTY 239

  Fly   270 SDGGVNGELYADVF 283
            .||      ||.||
  Fly   240 PDG------YARVF 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 48/209 (23%)
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 48/209 (23%)

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