DRSC/TRiP Functional Genomics Resources

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Protein Alignment intr and CG4653

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_573150.2 Gene:CG4653 / 32650 FlyBaseID:FBgn0030776 Length:254 Species:Drosophila melanogaster


Alignment Length:249 Identity:56/249 - (22%)
Similarity:94/249 - (37%) Gaps:78/249 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 IPAEIETLLTDGQATTEAPKAVKHFVMRILYENKV-ICSGALISTRLVLTSALCFPRTLRQPPPR 140
            :|||:.:          .|.::.      |..|.| :|.||||..:.:||:|.|......|   :
  Fly    29 LPAEVGS----------QPHSIS------LRRNGVHVCGGALIREKWILTAAHCVSLGGGQ---Q 74

  Fly   141 SYKLQASRSRIYSVANLITGAIEDMALLLLHA----------------PLEDPFV-----HPIDL 184
            ||..::...|:.|:..|..|.:..::.:::|.                .||...|     :||||
  Fly    75 SYPAKSYNVRVGSIQRLTGGQLVPLSKIIIHTNYSSSDAVGSNDLALLELETSVVLNANTNPIDL 139

  Fly   185 C-ESPLRRNDNV-TMYMSQQ------HLRFLRTK-LIPNSNCKRS-YAQDENAFITQTMLCALNS 239
            . |.|...:..: :.:.|.|      |:..:.|: .:..|:|:.. |.|.|:      :||.   
  Fly   140 ATERPAAGSQIIFSGWGSSQVDGSLSHVLQVATRQSLSASDCQTELYLQQED------LLCL--- 195

  Fly   240 NRLVD------CQTAKGDVLLHQDRLCGVDIY-----GQHCSDGGVNGELYADV 282
             ..||      |....|....:.::|.|:..:     |....||      |.||
  Fly   196 -SPVDEDFAGLCSGDAGAPASYNNQLVGIAAFFVSGCGSEQPDG------YVDV 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 49/213 (23%)
CG4653NP_573150.2 Tryp_SPc 30..252 CDD:238113 56/248 (23%)

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