DRSC/TRiP Functional Genomics Resources

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Protein Alignment intr and CG6041

DIOPT Version :10

Sequence 1:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster


Alignment Length:315 Identity:64/315 - (20%)
Similarity:108/315 - (34%) Gaps:98/315 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VIILAVSRGSVYG----SSETAPQFNVGEIPSNGQPYQIVRVIEYIVPYPYQRSPKISARFSSGG 67
            ::.:|:..|::..    |||||     |:|                       .|||...:.:  
  Fly     7 ILAIALFLGALASGESLSSETA-----GKI-----------------------EPKIVGGYDA-- 41

  Fly    68 NKEPNSLEIIPAEIETLLTDGQATTEAPKAVKHFVMRILYENKVICSGALISTRLVLTSALCFPR 132
                 |:|.:..::...||.....:              |.:..:|.|.:||.|||.|:|.|...
  Fly    42 -----SIEQVSYQVSIRLTANDKKS--------------YGSGHLCGGVVISQRLVATAAHCCYI 87

  Fly   133 TLRQPPPRSYKL---------------QASRSRIYSVANLIT-------GAIEDMALLLL--HAP 173
            |    ..:.|:.               ...|:.:|.:..|||       ....|:||:.:  :.|
  Fly    88 T----DKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTNDIALMFINGYIP 148

  Fly   174 LEDPFVHPIDLCESPLRRNDNVTM----------YMSQQHLRFLRTKLIPNSNCKRSYAQDENAF 228
            ...|.|..:.|....:..|.:..:          ..|...|:.....::..:.|:.||..     
  Fly   149 WNWPTVTALALNSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSYTTCRISYNS----- 208

  Fly   229 ITQTMLCALNSNRLVD-CQTAKGDVLLHQDRLCGVDIYGQHCSDGGVNGELYADV 282
            |..:.:||...:..|| ||...|..:.....|.|:..||..|:..|..| :|.:|
  Fly   209 IPVSQVCAGYLSGGVDACQGDSGGPMSCNGMLAGIVSYGAGCAAPGYPG-VYTNV 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 47/206 (23%)
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 54/260 (21%)

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