DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and galnt16

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_001339749.3 Gene:galnt16 / 799387 ZFINID:ZDB-GENE-131120-189 Length:567 Species:Danio rerio


Alignment Length:541 Identity:195/541 - (36%)
Similarity:295/541 - (54%) Gaps:64/541 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VIFIRNDDASSANELLSFMNESEESDHLDWRVFISHTP-ETSEDFYQ---YNIHLSNALGLIRKL 89
            :|..|........:||...:|         :.|:|... ...||.|:   :|:..|:.||..|.:
Zfish    66 LIVTRAPQLEQQGQLLGLFDE---------KAFLSSKQLRPGEDPYREHAFNLQESDRLGSERAI 121

  Fly    90 PVTRHHSCT--TRNSILPAPLEANVSVVISFHNEARSMLLRTIVSLLSRSPEDYLHELILVDDGS 152
            ..|||:.|.  |.:..||.     .|::|:|||||||.|||||.|:|.|||...:.|:|||||.|
Zfish   122 RDTRHYRCASMTFDPDLPP-----TSIIITFHNEARSTLLRTIKSVLMRSPPHLILEIILVDDFS 181

  Fly   153 Q--RDVTLLDDLKRWMGGVFGSRYRLGLTFLRNQERMGLIWSRNRGASLASGRYVLFLDSHCEVN 215
            .  .|..||..:.:             :..|||:.|.|||.||.||||.||...:.|||||||||
Zfish   182 SDPEDCRLLSQIPK-------------VRCLRNERREGLIRSRVRGASAASASILTFLDSHCEVN 233

  Fly   216 EGWLEPLLERLALNTNLAVSPLLDPIDPTTLSYRKGNELLKGGFDWSLHFHW----LKRQLTNQE 276
            ..||:|:::|:..:.:..|||::|.|.....:|...:..|:|||||||||.|    :::::...:
Zfish   234 TDWLQPMIQRVKEDHSRVVSPIIDVISLDNFAYLAASADLRGGFDWSLHFKWEQIPIEQKMARND 298

  Fly   277 SLEMPYQSPAFAGGVLMMSREWFLKLGSFNPYLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHI 341
            ..: |.::|..|||:.::.:.||..||.::.::.|||||:.||:.::|:|||.:||:||||:||:
Zfish   299 PTQ-PIRTPVIAGGIFVIEKGWFNHLGQYDTHMDIWGGENFELSFRVWMCGGSLEILPCSRVGHV 362

  Fly   342 FRRRHAFDFPPQSDRQLSPAQETYLHNSKIIAESWLDEYKNMFYALRPAARRIPLDHTYDELQRM 406
            ||:||.:|||..:       ..||:.|::..||.|:|:||..:||.||:|:........|.| .:
Zfish   363 FRKRHPYDFPEGN-------ALTYIKNTRRAAEVWMDDYKQYYYAARPSAQGKAFGSIADRL-AL 419

  Fly   407 RKERRCHPFEWYLRHVSPELRMHFDELSATGTLRNEDRCVHARQKDSQPILASC----YLSDITQ 467
            :::..|:.|.|||.:|.|||::...| .|...|:....|:.:...||.. ||.|    .:....:
Zfish   420 KRKLNCNSFRWYLENVYPELKIPEQE-EAYSLLKQGGLCLESHGTDSLG-LAECRSTPSIPASQK 482

  Fly   468 WSMLRQSGQLSTHRELCLAV-GF--GMRIALEPCGRNETVRRSQRWVRLGTHLLHAESHLCLDN- 528
            |:::..  |:..| :||||: .|  |.::.||||...|:   .|:|...|..|.|..|.||||: 
Zfish   483 WTLIEP--QIRQH-DLCLAITAFTAGSKVRLEPCNIKES---RQKWKPRGPALQHMISGLCLDSQ 541

  Fly   529 PLKDRLEMSTCRSHAVSQSFQ 549
            |......::.||....|||::
Zfish   542 PPSGPPAIAQCRPQVASQSWE 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 130/314 (41%)
Ricin_B_lectin 435..548 CDD:279046 37/120 (31%)
galnt16XP_001339749.3 Glyco_tranf_2_3 139..365 CDD:290369 104/244 (43%)
pp-GalNAc-T 142..436 CDD:133004 130/315 (41%)
Ricin_B_lectin 452..561 CDD:279046 35/115 (30%)
RICIN 455..562 CDD:238092 36/113 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 1 1.000 - - FOG0001204
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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