DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and galnt1

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_031759269.1 Gene:galnt1 / 594943 XenbaseID:XB-GENE-1013398 Length:559 Species:Xenopus tropicalis


Alignment Length:498 Identity:167/498 - (33%)
Similarity:280/498 - (56%) Gaps:49/498 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QYNIHLSNALGLIRKLPVTRHHSCTTRNSILPAPLEANVSVVISFHNEARSMLLRTIVSLLSRSP 138
            |:|:..|..:.|.|.||..|...|.|:  :.|..| ...||||.|||||.:.||||:.|:::|||
 Frog    83 QFNLMASEMIALNRSLPDVRLEGCKTK--VYPDSL-PTTSVVIVFHNEAWTTLLRTVHSVINRSP 144

  Fly   139 EDYLHELILVDDGSQRDVTLLDDLKRWMGGVFGSRYRLGLTFLRNQERMGLIWSRNRGASLASGR 203
            ...|.|:|||||.|:|:.     |||.: ..:..:..:.:..||.::|.|||.:|.|||:.:.|:
 Frog   145 RHLLQEIILVDDASEREF-----LKRPL-ETYVKKLTVPVHVLRMEQRSGLIRARLRGAAASKGQ 203

  Fly   204 YVLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTTLSYRKGNELLKGGFDWSLHFHWL 268
            .:.|||:|||...|||||||.|:..:....|.|::|.|...|..|..|:::..|||:|.|:|.|.
 Frog   204 VITFLDAHCECTVGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWY 268

  Fly   269 ---KRQLTNQE-SLEMPYQSPAFAGGVLMMSREWFLKLGSFNPYLKIWGGESIELAIKLWLCGGQ 329
               :|::..:. ...:|.::|..|||:..:.|::|.::|:::..:.|||||::|::.::|.|||.
 Frog   269 PVPQREMDRRRGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGT 333

  Fly   330 IEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSKIIAESWLDEYKNMFYALRPAARRI 394
            :|||.||.:||:||:...:.||..:.:.::       .|::.:||.|:||:||.||.:.|...::
 Frog   334 LEIVTCSHVGHVFRKATPYTFPGGTGQIIN-------KNNRRLAEVWMDEFKNFFYIISPGVTKV 391

  Fly   395 PLDHTYDELQR---MRKERRCHPFEWYLRHVSPELRM--HFDELSATGTLRN--EDRCVH--ARQ 450
                .|.::..   :|.:.:|.||.|||.:|.|:.::  |:..|   |.:||  .::|:.  ||:
 Frog   392 ----DYGDISTRVGLRHKLQCKPFSWYLENVYPDSQIPRHYYSL---GEIRNVETNQCLDNMARK 449

  Fly   451 KDSQPILASCYLSDITQWSMLRQSGQLSTHRELCLAVG--FGMRIALEPCGRNETVRRSQRW--- 510
            ::.:..:.:|:.....|......|.::.|. :|||.|.  .|..|.|: |   ..:|.:|.|   
 Frog   450 ENEKVGIFNCHGMGGNQVFSYTASKEIRTD-DLCLDVSKLNGPVIMLK-C---HHLRGNQLWEYD 509

  Fly   511 -VRLGTHLLHAESHLCLDNPLKDRLEMSTCRSHAVSQSFQFAL 552
             |:|  .|:|..|:.|||...::..::.:.|..:.|:|.|:.|
 Frog   510 PVKL--TLVHVNSNQCLDKAAEEDSQVPSIRDCSGSRSQQWLL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 117/315 (37%)
Ricin_B_lectin 435..548 CDD:279046 31/122 (25%)
galnt1XP_031759269.1 pp-GalNAc-T 119..419 CDD:133004 117/316 (37%)
Ricin_B_lectin 432..548 CDD:395527 32/122 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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