DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and galnt2

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_009305623.1 Gene:galnt2 / 570248 ZFINID:ZDB-GENE-041111-110 Length:565 Species:Danio rerio


Alignment Length:589 Identity:199/589 - (33%)
Similarity:316/589 - (53%) Gaps:91/589 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LFFLVIFI--------------RNDDAS--SANELLSFMNESEESDH---------LDWR----- 59
            |.|.|:::              |.||.|  ::|.:.:..| :::.||         :.|:     
Zfish     9 LCFAVLWVLGIAYYFYSGTTLSRKDDWSGINSNRIQTHSN-ADDKDHSLESLPLGKVRWQDYDQD 72

  Fly    60 VFISHT-PETSEDFY---QYNIHLSNALGLIRKLPVTRHHSCTTR--NSILPAPLEANVSVVISF 118
            :::..| ....:|.|   ::|...|:.|.:.|.:|.|||..|..:  .:.|||.     ||||:|
Zfish    73 LYVGATVVRPGQDPYARNKFNQVESDKLRMDRNIPDTRHDHCRHKQWRTDLPAS-----SVVITF 132

  Fly   119 HNEARSMLLRTIVSLLSRSPEDYLHELILVDDGSQ--RDVTLLDDLKRWMGGVFGSRYRLGLTFL 181
            ||||||.||||::|:|.:||...:.|:|||||.|.  .|..||..:::             :..|
Zfish   133 HNEARSALLRTVISVLKKSPPHLVKEIILVDDYSDNPEDGALLGKIEK-------------VRVL 184

  Fly   182 RNQERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTTL 246
            ||..|.||:.||.|||..|:...:.|||||||.||.||||||||:|.:....|||::|.|:....
Zfish   185 RNDRREGLMRSRVRGADAATASVLTFLDSHCECNEHWLEPLLERVAEDKTRVVSPIIDVINMDNF 249

  Fly   247 SYRKGNELLKGGFDWSLHFHW----LKRQLTNQESLEMPYQSPAFAGGVLMMSREWFLKLGSFNP 307
            .|...:..|||||||:|.|.|    |:::...|.:...|.::|..|||:.:|.:::|.:||.::.
Zfish   250 QYVGASADLKGGFDWNLVFKWDYMTLEQRRARQGNPIAPIKTPMIAGGLFVMDKDYFEELGKYDM 314

  Fly   308 YLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSKII 372
            .:.:||||::|::.::|.|||.:||:||||:||:||::|.:.||..|.       ..:..|::..
Zfish   315 MMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSG-------TVFARNTRRA 372

  Fly   373 AESWLDEYKNMFYALRPAARRIPLDHTYDELQRMRKERRCHPFEWYLRHVSPELRMHFDELSATG 437
            ||.|:|::||.:||..|:||.:|..:....|: |:|...|.||:|||.:|.||||:...:..|.|
Zfish   373 AEVWMDDFKNFYYAAVPSARNVPYGNIQSRLE-MKKRLGCKPFKWYLENVYPELRVPDHQDIAFG 436

  Fly   438 TLRNEDRCVHARQKDSQPILA--SCY------LSDITQ-WSMLRQSGQLSTHRELCLAV---GFG 490
            .|:....|:......:..::.  .|:      :|:.|| |::.:...  ..|.:|||.|   ..|
Zfish   437 ALQQGQNCLDTLGHFADGVVGVYECHNAGGNQVSNKTQEWALTKDKS--VKHMDLCLTVVDRTAG 499

  Fly   491 MRIALEPCGRNETVRRSQRWVRL--GTHLLHAESHLCLD--NPLKDRLEMSTCRSHAVSQSFQFA 551
            .:|.|:.|..|:|   .|:|.::  .|.|.|..|:||||  :.....|.:..| |.:::|.::|.
Zfish   500 SQIKLQGCRENDT---RQKWEQIDNNTKLRHVGSNLCLDSRSARSGGLTVEVC-SPSLTQQWKFT 560

  Fly   552 LEME 555
            |.::
Zfish   561 LNLQ 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 131/314 (42%)
Ricin_B_lectin 435..548 CDD:279046 34/128 (27%)
galnt2XP_009305623.1 pp-GalNAc-T 127..422 CDD:133004 131/315 (42%)
Glyco_tranf_2_3 127..351 CDD:290369 104/236 (44%)
Ricin_B_lectin 434..557 CDD:279046 34/128 (27%)
RICIN 444..559 CDD:238092 31/120 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 1 1.000 - - FOG0001204
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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