DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10000 and galntl6

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001139074.1 Gene:galntl6 / 568915 ZFINID:ZDB-GENE-090312-115 Length:600 Species:Danio rerio


Alignment Length:605 Identity:186/605 - (30%)
Similarity:291/605 - (48%) Gaps:105/605 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ICQLFFL----VIFIRNDDASSANELLSFMNESEESD----------HL----------DWRVFI 62
            :.|:.||    :||:.|....|.....|.|...|..:          |:          ||..:.
Zfish     8 VLQMAFLFMVALIFLPNVGLWSMYREKSLMKSHEPGEQGFPLGLNDGHIYTWTDGLRRRDWHDYE 72

  Fly    63 S------------H-------TPETSEDFYQ---YNIHLSNALGLIRKLPVTRHHSCTTRNSILP 105
            |            |       ..|..:..|:   :||::||.:.|.|.||..||.:|..:..:..
Zfish    73 SIRKDGQRVGKGEHGKPYPLVEDECDDSVYKENGFNIYVSNNIALDRSLPDIRHPNCKQKLYLEN 137

  Fly   106 APLEANVSVVISFHNEARSMLLRTIVSLLSRSPEDYLHELILVDDGSQRDVTLLDDLKRWMGGVF 170
            .|   |.|::|.||||..|.||||:.|:.:|:|:..:.|:|||||.|.|: .|...|..:|    
Zfish   138 LP---NTSIIIPFHNEGWSSLLRTLHSISNRTPDHLIAEIILVDDYSDRE-HLKAHLAEYM---- 194

  Fly   171 GSRYRLGLTFLRNQERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAVS 235
             ||:. .:..:|.::|.|||.:|..|||:|.|..:.|||||||.|..||.|||:::|.|....|.
Zfish   195 -SRFP-KVRIVRTKKREGLIRTRLLGASVARGEVLTFLDSHCEANINWLPPLLDQIAQNPKTIVC 257

  Fly   236 PLLDPIDPTTLSYR-KGNELLKGGFDWSLHFHWLKR-----QLTNQESLEMPYQSPAFAGGVLMM 294
            |::|.||.....|. :..:.::|.|||.:::   ||     :|...:..: |||||..|||:..:
Zfish   258 PMIDVIDHNHFGYEAQAGDAMRGAFDWEMYY---KRIPIPPELQGPDPSD-PYQSPVMAGGLFAV 318

  Fly   295 SREWFLKLGSFNPYLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLS 359
            :|:||.:||.::..|:|||||..|::.|:|:|||.:..|||||:|||:|:     :.|..    .
Zfish   319 NRQWFWELGGYDTGLEIWGGEQFEISFKVWMCGGSMYDVPCSRVGHIYRK-----YVPYK----V 374

  Fly   360 PAQETYLHNSKIIAESWLDEYKNMFYALRPAARRIPL-DHTYDELQRMRKERRCHPFEWYLRHVS 423
            |:..:...|.|.:||:|:|||....|..||..|.:.. |.|..  :.:||..:|..|:||:..|:
Zfish   375 PSGTSLARNLKRVAETWMDEYTEYIYQRRPEYRHLSTGDLTAQ--KELRKHLKCKDFKWYMNTVA 437

  Fly   424 PELRMHFDEL----SATGTLRN--EDRCVHAR--QKDSQPILASCYLSDITQ-WSM--------- 470
            .:|..::..:    :|.|.:||  ...||.::  ...::..|.:|......: |:.         
Zfish   438 WDLPKYYPPVEPLPAAWGEIRNAASGLCVDSKHGSTGTELRLDNCLKEGAERTWAHEQIFTFGWR 502

  Fly   471 --LRQSGQLSTHRELCL-AVGFGMRIALEPCGRNETVRRSQRW-VRLGTHLLHAESHLCLD-NPL 530
              :|....|.| |:.|. |:.....|.|..|   ..::.:|.| .|....|.|..|..|:| :|.
Zfish   503 EDIRPGDPLHT-RKFCFDAISQNSPITLYDC---HGMKGNQHWSYRKDKSLYHLVSSGCMDCSPN 563

  Fly   531 KDRLEMSTCRSHAVSQSFQF 550
            ..|:.|:.|...:.:|.:.|
Zfish   564 DKRIFMNKCDPKSETQQWIF 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 122/315 (39%)
Ricin_B_lectin 435..548 CDD:279046 31/131 (24%)
galntl6NP_001139074.1 pp-GalNAc-T 142..437 CDD:133004 122/316 (39%)
Glyco_tranf_2_2 142..404 CDD:287123 111/281 (40%)
Ricin_B_lectin 453..581 CDD:279046 31/131 (24%)
RICIN 455..583 CDD:238092 30/131 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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