DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and galnt11

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001070030.2 Gene:galnt11 / 558716 ZFINID:ZDB-GENE-060929-998 Length:590 Species:Danio rerio


Alignment Length:509 Identity:172/509 - (33%)
Similarity:257/509 - (50%) Gaps:96/509 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 YQYNIHLSNALGLIRKLPVTRHHSCTTRNSILPAPLEANVSVVISFHNEARSMLLRTIVSLLSRS 137
            :.:|:.:||.||..|.:|.||...|..|...:..|   ..|:||.|.|||.|.||||:.|:|.|:
Zfish   103 HAFNVLISNRLGYHRDVPDTRTDKCRDRAYSVSLP---TASIVICFFNEAFSALLRTVHSVLDRT 164

  Fly   138 PEDYLHELILVDDGSQRDVTLLDDLKRWMGGVFGSRYRLGLTFLRNQERMGLIWSRNRGASLASG 202
            |...|||:|||||.|:     |||||..:........:..:..:||::|.|||..|..|||.|:|
Zfish   165 PNYLLHEIILVDDHSE-----LDDLKEDLDSYVQQHLQKKVKVVRNEKREGLIRGRMIGASHATG 224

  Fly   203 RYVLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTTLSYRKGNELLKGGFDWSLHFHW 267
            ..::||||||||||.||:|||..:..|....|.|::|.|...||.|.. :.:::|||:|.|||.|
Zfish   225 EVLVFLDSHCEVNEAWLQPLLTPIKENRKTVVCPVIDIISADTLVYTP-SPIVRGGFNWGLHFKW 288

  Fly   268 LKRQLTNQESLEMPYQSPAFAGGVLMMSREWFLKLGSFNPYLKIWGGESIELAIKLWLCGGQIEI 332
            ....::...|.:...:||..|||:..|.|.:|.:||.::..:.|||||::|::.::|:||||:.|
Zfish   289 DPVPMSELNSPDGAIRSPTMAGGLFAMDRNYFYELGQYDRGMDIWGGENLEISFRIWMCGGQLLI 353

  Fly   333 VPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSKIIAESWLDEYKNMFYALRPAARRIPLD 397
            |||||:|||||:|..:..|        ..|:|..|||..:|..|:|:||..::||||..|    :
Zfish   354 VPCSRVGHIFRKRRPYGSP--------GGQDTMAHNSLRLAHVWMDDYKEQYFALRPELR----N 406

  Fly   398 HTYDELQR---MRKERRCHPFEWYLRHVSPELR----------------MHFDELSATGTLRN-- 441
            ..|.::..   :||..:||.|:|||.::.||::                :...::...|.|||  
Zfish   407 RDYGDISERVSIRKRLQCHSFKWYLDNIYPEMQVSSPHKPQQPVFINKGLKRPKVLQRGRLRNLL 471

  Fly   442 EDRCVHARQKDSQ---------------------------------------------PILASCY 461
            .|:|:.|:.:.||                                             |.|..|:
Zfish   472 ADKCLVAQGRPSQKGGAVVVKDCDPQDPEQEWAYDEEHELVLAGLLCLDMSEIRSSDPPRLMKCH 536

  Fly   462 LS-DITQWSMLRQSGQLSTHRELCLAVGFGMRI----ALEPCGRNETVRRSQRW 510
            .| ...||::.:::.........|||||..:.|    ::..|..:    |||:|
Zfish   537 GSGGSQQWTLGKKNWLYQVSVGQCLAVGDPLSIKGYVSMAICDDS----RSQQW 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 132/311 (42%)
Ricin_B_lectin 435..548 CDD:279046 26/128 (20%)
galnt11NP_001070030.2 GT2 135..468 CDD:224137 136/353 (39%)
pp-GalNAc-T 140..435 CDD:133004 132/312 (42%)
Ricin_B_lectin 465..586 CDD:279046 25/124 (20%)
RICIN 465..586 CDD:238092 25/124 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.780

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