DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and poc1bl

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001038243.2 Gene:poc1bl / 503760 ZFINID:ZDB-GENE-050306-41 Length:582 Species:Danio rerio


Alignment Length:595 Identity:179/595 - (30%)
Similarity:289/595 - (48%) Gaps:94/595 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ICQLF-----FLVIFIRNDDASSAN----------ELLSFMNESEESDHLDWRVFISHTPE---- 67
            :|.||     |.::.:|:...|.|:          :|.....|.|:|::|...|:....|:    
Zfish    15 VCFLFSLLWLFCLLIVRSSPPSLADNDGRRDILARDLPPIEEEEEDSENLLRPVYEKLPPDSNAP 79

  Fly    68 -----------TSEDFYQ---------YNIHLSNALGLIRKLPVTRHHSCTTRN-SILPAPLEAN 111
                       |||:..:         .||.:|:.:.|.|.:...|.|.|..:. :|...|   .
Zfish    80 GEYGRATRLTLTSEEKKEEEASVERCAINIFISDKISLHRHIQDNRMHECKAKKYNIRRLP---T 141

  Fly   112 VSVVISFHNEARSMLLRTIVSLLSRSPEDYLHELILVDDGSQRDVTLLDDLKRWMGGVFGSRYRL 176
            .||||:|:|||.|.|||||.|:|..:|...|.::|||||.|.|.. |...|.:::..:  .|.||
Zfish   142 TSVVIAFYNEAWSTLLRTIHSVLETTPAVLLKDIILVDDFSDRGY-LKSQLAQYISNL--ERVRL 203

  Fly   177 GLTFLRNQERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPI 241
                :|.::|.||:.:|..||:.|:|..:.|||.|||...||:||||||:|.|....:.|::|.|
Zfish   204 ----IRTKKREGLVRARLIGATYATGSVLTFLDCHCECVPGWIEPLLERIAENETTIICPVIDTI 264

  Fly   242 DPTTLS-YRKGNELLKGGFDWSLHFHW-----LKRQLTNQESLEMPYQSPAFAGGVLMMSREWFL 300
            |..|.. |.:..|.:.|||||.|.|.|     :.|::  ::|...|.:||..|||:..:|:.:|.
Zfish   265 DWNTFEFYMQTEEPMVGGFDWRLTFQWHAVPEIDRKI--RKSRIDPIRSPTMAGGLFAVSKAYFE 327

  Fly   301 KLGSFNPYLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETY 365
            .||:::..:::||||::||:.::|.|||.:||.|||.:||:|.::..:            |:..:
Zfish   328 YLGTYDMGMEVWGGENLELSFRVWQCGGSLEIHPCSHVGHVFPKKAPY------------ARSNF 380

  Fly   366 LHNSKIIAESWLDEYKNMFYALRPAARRIPLDHTYDELQR---MRKERRCHPFEWYLRHVSPELR 427
            |.|:...||.|:|.||..||...|.||:    .:|.::..   :|...:|..|||||::|.|.|.
Zfish   381 LQNTVRAAEVWMDTYKQHFYNRNPPARK----ESYGDISERIVLRNRLQCKSFEWYLQNVYPGLH 441

  Fly   428 MHFDELSATGTLRN---EDRCVHARQKDSQPI-----LASCYLSDITQWSMLRQSGQL--STHRE 482
            :..|.....|.:|:   ...|:.....|..|.     |..|:.....|:.......::  ::..|
Zfish   442 VPEDRPGWHGAVRSAGIHSECLDYNAPDHNPTGAHLSLFGCHGQGGNQYFEYTSQREIRFNSVTE 506

  Fly   483 LCLAVGFGM-RIALEPCGRNETVR-RSQRW-VRLGTHLLHAESHLCLDNPLKDR----LEMSTCR 540
            ||..|..|| .|.::.|.::...: .|..| .|....:.|..|::|:.:...:.    ::|.:|.
Zfish   507 LCAEVQDGMTHIGMKHCPQDGVPKPPSIIWQFREDGSIFHPHSNMCITSYRTEEGRADIQMRSCS 571

  Fly   541 SHAVSQSFQF 550
            :....|.:.|
Zfish   572 TGDKHQRWSF 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 122/317 (38%)
Ricin_B_lectin 435..548 CDD:279046 25/129 (19%)
poc1blNP_001038243.2 WcaA 139..434 CDD:223539 122/322 (38%)
pp-GalNAc-T 143..437 CDD:133004 122/318 (38%)
RICIN 451..581 CDD:238092 25/129 (19%)
Ricin_B_lectin 451..579 CDD:279046 25/127 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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