DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10000 and Galntl6

DIOPT Version :10

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001129228.1 Gene:Galntl6 / 361142 RGDID:1564773 Length:601 Species:Rattus norvegicus


Alignment Length:615 Identity:191/615 - (31%)
Similarity:302/615 - (49%) Gaps:122/615 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FLICQLFFLV--IFIRNDDASSANELLSFMNESEESDH---------------------LDWRVF 61
            ||...|.|.|  ||:.|....|..:....|..:|.::|                     .||..:
  Rat     8 FLQMTLLFTVALIFLPNIGLWSLYKDKHLMKSAEPAEHQTFPLGLGDGQFYSWTDGLRRKDWHDY 72

  Fly    62 IS------------H---TPETSEDF----YQ---YNIHLSNALGLIRKLPVTRHHSCTTRNSIL 104
            :|            |   .|.|.||.    |:   :||.:||.:.|.|.||..||.:|..:..:.
  Rat    73 VSIQKDALRSGKGEHGKPYPLTEEDHDDSAYRENGFNIFVSNNIALERSLPDIRHANCKHKMYLE 137

  Fly   105 PAPLEANVSVVISFHNEARSMLLRTIVSLLSRSPEDYLHELILVDDGSQRDVTLLDDLKRWMGGV 169
            ..|   |.|::|.||||..:.|||||.|:::|:||..:.|:|||||.|.|: .|.|.|:.:|   
  Rat   138 RLP---NTSIIIPFHNEGWTSLLRTIHSIINRTPESLIAEIILVDDFSDRE-HLKDKLEDYM--- 195

  Fly   170 FGSRYRLGLTFLRNQERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAV 234
              :|:.: :..:|.::|.|||.:|..|||:|.|..:.|||||||||..||.|||.::|||....|
  Rat   196 --ARFPI-VRIVRTKKREGLIRTRLLGASVARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIV 257

  Fly   235 SPLLDPIDPTTLSYR-KGNELLKGGFDWSLHFHWLKR-----QLTNQESLEMPYQSPAFAGGVLM 293
            .|::|.||.:...|. :..:.::|.|||.:::   ||     :|...:..| |::||..|||:..
  Rat   258 CPMIDVIDHSHFGYEAQAGDAMRGAFDWEMYY---KRIPIPPELQRADPSE-PFESPVMAGGLFA 318

  Fly   294 MSREWFLKLGSFNPYLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQL 358
            :.|:||.:||.::|.|:|||||..|::.|:|:|||::..|||||:|||:|:     :.|..    
  Rat   319 VDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRK-----YVPYK---- 374

  Fly   359 SPAQETYLHNSKIIAESWLDEYKNMFYALRPAARRIPLDHTYDELQRMRKERRCHPFEWYLRHVS 423
            .|:..:...|.|.:||:|:||:....|..||..|.:.......: :.:||..:|..|:|::..|:
  Rat   375 VPSGTSLARNLKRVAETWMDEFAEYIYQRRPEYRHLSTGDISAQ-KELRKRLKCKDFKWFMAAVA 438

  Fly   424 PELRMHFDEL----SATGTLRN--EDRCVHARQ-------------KDSQPILASCYLSDITQWS 469
            .::..::..:    :|.|.:||  .:.||.::.             ||.         |:.| ||
  Rat   439 WDVPKYYPPVEPLPAAWGEIRNVAANLCVDSKHGAMGTELRLDICVKDG---------SERT-WS 493

  Fly   470 M-----------LRQSGQLSTHRELCL-AVGFGMRIALEPCGRNETVRRSQRW-VRLGTHLLHAE 521
            .           :|....|.| |:.|| |:.....:.|..|   ..::.:|.| .|....|.|..
  Rat   494 HEQLFTFGWREDIRPGEPLHT-RKFCLDAISHSSPVTLYDC---HGMKGNQLWGYREDRTLFHPV 554

  Fly   522 SHLCLD-NPLKDRLEMSTCRSHAVSQSFQF 550
            |:.|:| ||.:.::.|:.|...:.:|.:.|
  Rat   555 SNSCMDCNPAEKKVFMARCDPLSETQQWMF 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 121/314 (39%)
beta-trefoil_Ricin-like 432..550 CDD:483949 34/150 (23%)
Galntl6NP_001129228.1 pp-GalNAc-T 143..438 CDD:133004 121/315 (38%)
beta-trefoil_Ricin_GALNTL6 449..594 CDD:467355 35/150 (23%)

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