DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and Galnt9

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001116116.1 Gene:Galnt9 / 304571 RGDID:1311523 Length:604 Species:Rattus norvegicus


Alignment Length:602 Identity:172/602 - (28%)
Similarity:277/602 - (46%) Gaps:113/602 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IIAFLI-CQL----FFLVIFIRNDDASSANEL--LSFMNESE----ESDHLDWRVF--------- 61
            ||.|.: |:|    ..||..:|..|....|.|  .|.:.:.|    ..|||:..|:         
  Rat    21 IILFSVYCRLQDRSEALVQVVRGADRRMRNRLSKASALTDREAILQRLDHLEEVVYNQLNGLAKP 85

  Fly    62 ----------------------ISHTPETSEDFYQYNIHLSNALGLIRKLPVTRHHSC--TTRNS 102
                                  ...|....||| .||..||:.:.|.|.:|..|...|  .|.:.
  Rat    86 IGLVEGPGGLGQGGVAATLQDDSQETEGKFEDF-GYNAQLSDRISLDRTIPDYRPKRCRQITYSE 149

  Fly   103 ILPAPLEANVSVVISFHNEARSMLLRTIVSLLSRSPEDYLHELILVDDGSQRDVTLLDDLKRWMG 167
            .||     .:|||..|.|||.|::||::.|:::.:|...|.|:|||||.|. :|.|..:|.::: 
  Rat   150 DLP-----QISVVFIFVNEALSVILRSVHSVVNHTPSQLLKEIILVDDNSD-NVELKFNLDQYV- 207

  Fly   168 GVFGSRYRLGLTFLRNQERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNL 232
               ..||...:..:||..|.|||.:|.:|..:|:...|.|.|:|.|.|.||.||.|.|:..:...
  Rat   208 ---HKRYPGLVKVVRNSRREGLIRARLQGWKVATAPIVGFFDAHVEFNTGWAEPALARIQEDRRR 269

  Fly   233 AVSPLLDPIDPTTLSYRKGNELLKGGFDWSLHFHWLKRQLTNQESLE-----MPYQSPAFAGGVL 292
            .:.|.:|.|..:|...::...... |::|.|   |....:..|:.|:     .|.::||..|...
  Rat   270 IILPAIDNIKYSTFEVQQYASAAH-GYNWGL---WCMYIIPPQDWLDRGDESAPIRTPAMIGCSF 330

  Fly   293 MMSREWFLKLGSFNPYLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHIFRRRHAF--DFPPQSD 355
            ::.||:|..:|..:|.::::|.|:|||.:::|.|||.:|::||||:.||.|.:..:  |....:.
  Rat   331 VVDREYFGDIGLLDPGMEVYGAENIELGMRVWQCGGSMEVLPCSRVAHIERTKKPYNNDIDYYAK 395

  Fly   356 RQLSPAQETYLHNSKIIAESWLDEYKNMFYALRPAARRIPLDH------TYDELQRMRKERRCHP 414
            |           |:...||.|:|::|:..|    .|..||:.:      ...|...:|::.:|..
  Rat   396 R-----------NALRAAEVWMDDFKSHVY----MAWNIPMTNPGVDFGDVSERLALRQKLKCRS 445

  Fly   415 FEWYLRHVSPELRMHFDELSATGTLRNEDR---CV-HARQKDSQPILASCY--LSDITQWSM--L 471
            |:|||.:|.||:|::.:.|: .|.:||...   |: ...:.|.:.||..|:  .|.:.::|.  |
  Rat   446 FKWYLENVYPEMRIYNNTLT-YGEVRNSKASGYCLDQGAEDDDRAILYPCHGMSSQLVRYSADGL 509

  Fly   472 RQSGQLSTHREL----CLA-VGFGMRIALEPCGRNETVRRSQR-W--VRLGTHLLHAESHLCLDN 528
            .|.|.|.:...|    ||. .|.|....|:.|  .:..|.:|| |  .:.|. ::..::..||:.
  Rat   510 LQLGPLGSTAFLPDSKCLVDDGRGRMPTLKKC--EDVARPTQRLWDFTQSGP-IVSRDTGRCLEV 571

  Fly   529 PL-KD-----RLEMSTC 539
            .: ||     ||.:..|
  Rat   572 EMSKDANFGLRLVVQRC 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 101/321 (31%)
Ricin_B_lectin 435..548 CDD:279046 33/127 (26%)
Galnt9NP_001116116.1 pp-GalNAc-T 155..454 CDD:133004 101/322 (31%)
Ricin_B_lectin 465..593 CDD:279046 33/128 (26%)
RICIN 467..595 CDD:238092 33/125 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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