DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and Galnt18

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001073353.1 Gene:Galnt18 / 293181 RGDID:1309623 Length:607 Species:Rattus norvegicus


Alignment Length:605 Identity:170/605 - (28%)
Similarity:266/605 - (43%) Gaps:110/605 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LICQL-------FFLVIFIRNDDASSANELLSFMNES----EESDHLDWRVFISH------TPET 68
            :||.|       :...:::|..:.:...:|.....::    |..|||: .|...|      .||.
  Rat    23 IICLLYVGWVTNYIASVYVRGQEPAPDKKLEEDKGDTLKIIERLDHLE-NVIKQHIQEAPAKPEE 86

  Fly    69 SE-----------------------------DFYQYNIHLSNALGLIRKLPVTRHHSCTTRNSIL 104
            :|                             .:|.||.:||:.|.|.|.||..|...|  ||...
  Rat    87 AEAEPFTDSSLFAHWGQELSPEGRRVALKQFQYYGYNAYLSDRLPLDRPLPDLRPSGC--RNLSF 149

  Fly   105 PAPLEANVSVVISFHNEARSMLLRTIVSLLSRSPEDYLHELILVDDGSQRDVTLLDDLKRWMGGV 169
            |..| ..||:|..|.|||.|:|||:|.|.:.|:|...|.|:|||||.|..: .|.:.|..::..|
  Rat   150 PDSL-PEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLKEIILVDDNSSNE-ELKEKLTEYVDKV 212

  Fly   170 FGSRYRLGLTFLRNQERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAV 234
            .|.:... :..:|:.::.|||.||..|...|:...|...|:|.|.|.||.||:|.|:..|....:
  Rat   213 NGQKPGF-IKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRII 276

  Fly   235 SPLLDPIDPTTLSYRKGNELLKGGFDWSLHFHWLK--RQLTNQESLEMPYQSPAFAGGVLMMSRE 297
            ||..|.|........: ..|...||||.|...:|.  :.....|:...|.:|||.. |..::.|:
  Rat   277 SPSFDNIKYDNFEIEE-YPLAAQGFDWELWCRYLNPPKAWWKLENSTAPIRSPALI-GCFIVDRQ 339

  Fly   298 WFLKLGSFNPYLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQ 362
            :|.::|..:..::::|||::||.|::|.|||.:|::|||||.||.|....:            .:
  Rat   340 YFEEIGLLDEGMEVYGGENVELGIRVWQCGGSVEVLPCSRIAHIERAHKPY------------TE 392

  Fly   363 ETYLH---NSKIIAESWLDEYKNMFYALRPAARRIPLDHTYDEL------QRMRKERRCHPFEWY 418
            :...|   |:..:||.|:||:|:..|    .|..||.:.:..::      :.:||:.:|..|.||
  Rat   393 DLTAHVRRNALRVAEVWMDEFKSHVY----MAWNIPQEDSGIDIGDITARKALRKQLQCKTFRWY 453

  Fly   419 LRHVSPELRMHFDELSATGTLRNE---DRCV-HARQKDSQPILASCYLSDITQWSMLRQSGQ--- 476
            |..|.||:||:.| :.|.|.|:|.   |.|. .....::.||:..|:  .:|..::...|.|   
  Rat   454 LVSVYPEMRMYSD-IIAYGVLQNSLKTDLCFDQGPDTENVPIVYICH--GMTPQNVYYTSSQQIH 515

  Fly   477 -------LSTHRELCLAVGFGMRIALEPCGRNETVRRSQRW-VRLGTHLLHAESHLCLDNPLKDR 533
                   :......|| |....|..|..|...:..|....| ...|..:.:.:|..||:  |::.
  Rat   516 VGVLSPTIDDDDNRCL-VDVNSRPRLIECSYAKAKRMKLHWQFSQGGSIQNRKSKRCLE--LQEN 577

  Fly   534 LEMSTCRSHAVSQSFQFALE 553
            .:|..        .||..|:
  Rat   578 SDMEF--------GFQLVLQ 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 104/319 (33%)
Ricin_B_lectin 435..548 CDD:279046 26/127 (20%)
Galnt18NP_001073353.1 pp-GalNAc-T 157..458 CDD:133004 104/320 (33%)
Ricin_B_lectin 469..596 CDD:279046 29/134 (22%)
RICIN 471..598 CDD:238092 28/132 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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