DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and Galnt2

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_038953584.1 Gene:Galnt2 / 292090 RGDID:1310692 Length:570 Species:Rattus norvegicus


Alignment Length:507 Identity:182/507 - (35%)
Similarity:284/507 - (56%) Gaps:49/507 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 TSEDFY---QYNIHLSNALGLIRKLPVTRHHSCTTRNSILPAPLEANVSVVISFHNEARSMLLRT 129
            :.:|.|   ::|...|:.|.:.|.:|.|||..|..:...:..|.   .||||:|||||||.||||
  Rat    93 SGQDPYARNKFNQVESDKLRMDRSIPDTRHDQCQRKQWRVDLPA---TSVVITFHNEARSALLRT 154

  Fly   130 IVSLLSRSPEDYLHELILVDDGSQ--RDVTLLDDLKRWMGGVFGSRYRLGLTFLRNQERMGLIWS 192
            :||:|.|||...:.|:|||||.|.  .|..||..:::             :..|||..|.||:.|
  Rat   155 VVSVLKRSPPHLIKEIILVDDYSNDPEDGALLGKIEK-------------VRVLRNDRREGLMRS 206

  Fly   193 RNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTTLSYRKGNELLKG 257
            |.|||..|..:.:.|||||||.||.||||||||:|.:....|||::|.|:.....|...:..|||
  Rat   207 RVRGADAAQAKVLTFLDSHCECNERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKG 271

  Fly   258 GFDWSLHFHW----LKRQLTNQESLEMPYQSPAFAGGVLMMSREWFLKLGSFNPYLKIWGGESIE 318
            ||||:|.|.|    .:::.:.|.:...|.::|..|||:.:|.:.:|.:||.::..:.:||||::|
  Rat   272 GFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLE 336

  Fly   319 LAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSKIIAESWLDEYKNM 383
            ::.::|.|||.:||:||||:||:||::|.:.||..|.       ..:..|::..||.|:||:|:.
  Rat   337 ISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSG-------TVFARNTRRAAEVWMDEFKHF 394

  Fly   384 FYALRPAARRIPLDHTYDELQRMRKERRCHPFEWYLRHVSPELRMHFDELSATGTLRNEDRCVHA 448
            :||..|:||.:|..:....|: :||:..|.||:|||.:|.||||:...:..|.|.|:....|:..
  Rat   395 YYAAVPSARNVPYGNIQSRLE-LRKKLGCKPFKWYLDNVYPELRVPDHQDIAFGALQQGTNCLDT 458

  Fly   449 RQKDSQPILA--SCYLSDITQ-WSMLRQSGQLSTHRELCLAV---GFGMRIALEPCGRNETVRRS 507
            ....:..::.  .|:.:...| |::.::..  ..|.:|||.|   ..|..|.|:.|..|::   .
  Rat   459 LGHFADGVVGIYECHNAGGNQEWALTKEKS--VKHMDLCLTVVDRSPGSLIRLQGCRENDS---R 518

  Fly   508 QRWVRL--GTHLLHAESHLCLDN--PLKDRLEMSTCRSHAVSQSFQFALEME 555
            |:|.::  .:.|.|..|:||||:  .....|.:..| ..|:||.::|:|.::
  Rat   519 QKWEQIEGNSKLRHVGSNLCLDSRTAKSGGLSVEVC-GPALSQQWKFSLNLQ 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 132/314 (42%)
Ricin_B_lectin 435..548 CDD:279046 31/122 (25%)
Galnt2XP_038953584.1 pp-GalNAc-T 138..433 CDD:133004 132/315 (42%)
Ricin_B_lectin 445..562 CDD:395527 31/122 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 1 1.000 - - FOG0001204
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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