DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and Galnt18

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_776100.2 Gene:Galnt18 / 233733 MGIID:2446239 Length:622 Species:Mus musculus


Alignment Length:620 Identity:170/620 - (27%)
Similarity:266/620 - (42%) Gaps:125/620 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LICQL-------FFLVIFIRNDDASSANELLSFMNES----EESDHLDWRVFISH------TPET 68
            :||.|       :...:::|..:.....:|.....::    |..|||: .|...|      .||.
Mouse    23 IICLLYVGWVTNYIASVYVRGQEPVPDKKLEEDKGDTLKIIERLDHLE-NVIKQHIQEAPAKPEE 86

  Fly    69 SE-----------------------------DFYQYNIHLSNALGLIRKLPVTRHHSCTTRNSIL 104
            :|                             .:|.||.:||:.|.|.|.||..|...|  ||...
Mouse    87 AEAEPFTDSSLFAHWGQELSPEGRRVALKQFQYYGYNAYLSDRLPLDRPLPDLRPSGC--RNLSF 149

  Fly   105 PAPLEANVSVVISFHNEARSMLLRTIVSLLSRSPEDYLHELILVDDGSQRDVTLLDDLKRWMGGV 169
            |..| ..||:|..|.|||.|:|||:|.|.:.|:|...|.|:|||||.|..: .|.:.|..::..|
Mouse   150 PDSL-PEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLKEIILVDDNSSNE-ELKEKLTEYVDKV 212

  Fly   170 FGSRYRLGLTFLRNQERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAV 234
            .|.:... :..:|:.::.|||.||..|...|:...|...|:|.|.|.||.||:|.|:..|....:
Mouse   213 NGQKPGF-IKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRII 276

  Fly   235 SPLLDPIDPTTLSYRKGNELLKGGFDWSLHFHWLK--RQLTNQESLEMPYQSPAFAGGVLMMSRE 297
            ||..|.|........: ..|...||||.|...:|.  :.....|:...|.:|||.. |..::.|:
Mouse   277 SPSFDNIKYDNFEIEE-YPLAAQGFDWELWCRYLNPPKAWWKLENSTAPIRSPALI-GCFIVDRQ 339

  Fly   298 WFLKLGSFNPYLKIWGGESIELAIK---------------LWLCGGQIEIVPCSRIGHIFRRRHA 347
            :|.::|..:..::::|||::||.|:               :|.|||.:|::|||||.||.|....
Mouse   340 YFEEIGLLDEGMEVYGGENVELGIRVSEISHTGLSSAPMMVWQCGGSVEVLPCSRIAHIERAHKP 404

  Fly   348 FDFPPQSDRQLSPAQETYLH---NSKIIAESWLDEYKNMFYALRPAARRIPLDHTYDEL------ 403
            :            .::...|   |:..:||.|:||:|:..|    .|..||.:.:..::      
Mouse   405 Y------------TEDLTAHVRRNALRVAEVWMDEFKSHVY----MAWNIPQEDSGIDIGDITAR 453

  Fly   404 QRMRKERRCHPFEWYLRHVSPELRMHFDELSATGTLRNE---DRCV-HARQKDSQPILASCYLSD 464
            :.:||:.:|..|.|||..|.||:||:.| :.|.|.|:|.   |.|: .....::.||:..|:  .
Mouse   454 KALRKQLQCKTFRWYLVSVYPEMRMYSD-IIAYGVLQNSLKTDLCLDQGPDTENVPIVYICH--G 515

  Fly   465 ITQWSMLRQSGQ----------LSTHRELCLAVGFGMRIALEPCGRNETVRRSQRW-VRLGTHLL 518
            :|..::...|.|          :......|| |....|..|..|...:..|....| ...|..:.
Mouse   516 MTPQNVYYTSSQQIHVGILSPTVDDDDNRCL-VDVNSRPRLIECSYAKAKRMKLHWQFSQGGSIQ 579

  Fly   519 HAESHLCLDNPLKDRLEMSTCRSHAVSQSFQFALE 553
            :.:|..||:  |::..:|..        .||..|:
Mouse   580 NRKSKRCLE--LQENSDMEF--------GFQLVLQ 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 104/334 (31%)
Ricin_B_lectin 435..548 CDD:279046 26/127 (20%)
Galnt18NP_776100.2 Catalytic subdomain A 153..267 46/116 (40%)
pp-GalNAc-T 157..473 CDD:133004 104/335 (31%)
Catalytic subdomain B 324..400 26/76 (34%)
Ricin_B_lectin 484..611 CDD:279046 29/134 (22%)
RICIN 486..613 CDD:238092 28/132 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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