DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and Galnt6

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001155239.1 Gene:Galnt6 / 207839 MGIID:1891640 Length:622 Species:Mus musculus


Alignment Length:644 Identity:191/644 - (29%)
Similarity:296/644 - (45%) Gaps:133/644 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RHCSFYIIAFLICQLFFLVIFIRNDDASS----------------ANELLSFM-----NESEESD 54
            ||.|..:.  ::..:|.|.:|||..|.|:                .:::|.||     |..:...
Mouse     7 RHMSLRLA--MLGSVFMLFLFIRQKDVSNQEQAMEKPWLKSLAGQKDQVLDFMLGAVNNIRDVMP 69

  Fly    55 HLDWR--------VFISH-------TP--------------------------------ETSEDF 72
            .|..|        |..:|       ||                                ||.|..
Mouse    70 KLQIRAPEPPQTLVSTNHSCLPGFYTPAELKPFWDRPPQDPNSPGADGKAFQKKEWTNLETKEKE 134

  Fly    73 YQYNIHLSNA-----LGLIRKL-PVTRHHSCTTRNSILPAPLEANVSVVISFHNEARSMLLRTIV 131
            ..|..|..||     :.|.|.| |.||...|..:......|| ...||:|.|||||.|.||||:.
Mouse   135 EGYKKHCFNAFASDRISLQRSLGPDTRPPECVDQKFRRCPPL-PTTSVIIVFHNEAWSTLLRTVY 198

  Fly   132 SLLSRSPEDYLHELILVDDGSQRDVTLLDDLKRWMGGVFGSRYRLGLTFLRNQERMGLIWSRNRG 196
            |:|..||...|.|:|||||.| .|..|.:.|::::     .:.:: :..:|.:||.|||.:|..|
Mouse   199 SVLHTSPAILLKEIILVDDAS-TDEHLKERLEQYV-----QQLQI-VRVVRQRERKGLITARLLG 256

  Fly   197 ASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTTLSY----RKGNELLKG 257
            ||:|....:.|||:|||...|||||||.|:|.:....|||.:..||..|..:    ::|....:|
Mouse   257 ASVAQAEVLTFLDAHCECFHGWLEPLLARIAEDKTAVVSPDIVTIDLNTFQFSRPVQRGKAHSRG 321

  Fly   258 GFDWSLHFHW-----LKRQLTNQESLEMPYQSPAFAGGVLMMSREWFLKLGSFNPYLKIWGGESI 317
            .|||||.|.|     .::|....|:  .|.:||.||||:..:|:.:|..:|:::..::|||||::
Mouse   322 NFDWSLTFGWEMLPEHEKQRRKDET--YPIKSPTFAGGLFSISKAYFEHIGTYDNQMEIWGGENV 384

  Fly   318 ELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSKIIAESWLDEYKN 382
            |::.::|.||||:||:|||.:||:||.:....||        ........|...:||.|:|:||.
Mouse   385 EMSFRVWQCGGQLEIIPCSVVGHVFRTKSPHTFP--------KGTSVIARNQVRLAEVWMDDYKK 441

  Fly   383 MFYALRPAARRIPLDHTYDELQ---RMRKERRCHPFEWYLRHVSPELRMHFDELSAT--GTLRN- 441
            :||.....|.::..::.:.::.   |:|::.|||.|.|||.:|.||  |...:|:.|  |.::| 
Mouse   442 IFYRRNLQAAKMVQENNFGDISERLRLREQLRCHNFSWYLHNVYPE--MFVPDLNPTFYGAIKNL 504

  Fly   442 -EDRC--VHARQKDSQPIL--------ASCYLSDITQWSMLRQSGQLSTHRELCLAVGFGMRIAL 495
             .::|  |....:..:|::        .:.|....:|..:....|     ::|||... |..:.|
Mouse   505 GTNQCLDVGENNRGGKPLIMYVCHNLGGNQYFEYTSQRDLRHNIG-----KQLCLHAS-GSTLGL 563

  Fly   496 EPC---GRNETVRRSQRWVRLGTHLL-HAESHLCLDNPLKDRLEMSTCRSHAVSQSFQF 550
            ..|   |:|..|.:.:.|......|: ::.|..||.:..| :..|:.|......|.:.|
Mouse   564 RSCQFVGKNSRVPKDEEWELTQDQLIRNSGSGTCLTSQDK-KPAMAPCNPRDPYQLWLF 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 122/320 (38%)
Ricin_B_lectin 435..548 CDD:279046 27/130 (21%)
Galnt6NP_001155239.1 Catalytic subdomain A 176..285 53/116 (46%)
pp-GalNAc-T 180..485 CDD:133004 122/321 (38%)
Catalytic subdomain B 348..410 28/61 (46%)
Ricin_B_lectin 497..619 CDD:366226 26/128 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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