DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and gly-9

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001022876.1 Gene:gly-9 / 176557 WormBaseID:WBGene00012934 Length:579 Species:Caenorhabditis elegans


Alignment Length:611 Identity:180/611 - (29%)
Similarity:285/611 - (46%) Gaps:106/611 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KYCGPR-HCSFYIIAFLICQLFFLVIFIRNDDASSANELLSFMNESEESDHL--DWRVFISHTPE 67
            :|..|| ..:|.|.|||....|.:|.:.|||...:..:.......:||...|  .|...:...|.
 Worm     3 RYIIPRKKGTFVIAAFLTVAFFCIVAYHRNDRRRTKFQFPDIEKYAEELVRLPETWNGELHQIPN 67

  Fly    68 -----------------TSEDF---------YQYNIHLSNALGLIRKLPVTRHHSCTTRN---SI 103
                             |.:|.         :..|:|.|:.:.|.|.:|..|..:|....   :.
 Worm    68 YTAPREGPGEKGKPVVLTGKDAELGQADMKKWFMNVHASDKISLDRDVPDPRIQACKDIKYDYAA 132

  Fly   104 LPAPLEANVSVVISFHNEARSMLLRTIVSLLSRSPEDYLHELILVDDGSQR---DVTLLDDLKRW 165
            ||     ..||:|.|.:||.:.||||:.|:::|||.:.|.|:||:||.|:|   ...|.:.:|| 
 Worm   133 LP-----KTSVIIIFTDEAWTPLLRTVHSVINRSPPELLQEVILLDDNSKRQELQEPLDEHIKR- 191

  Fly   166 MGGVFGSRYRLGLTFLRNQERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNT 230
                ||.:.||    :|...|.|||.::..||..|.|..::|||||||.|.|||||:::|::...
 Worm   192 ----FGGKVRL----IRKHVRHGLIRAKLAGAREAVGDIIVFLDSHCEANHGWLEPIVQRISDER 248

  Fly   231 NLAVSPLLDPIDPTTLSYRKGNELLKGGFDWSLHFHW--LKRQLTNQESLEMPY-QSPAFAGGVL 292
            ...|.|::|.|...||:|.....|..|||.|:|||.|  |..:...:.:....| :||..|||:|
 Worm   249 TAIVCPMIDSISDNTLAYHGDWSLSTGGFSWALHFTWEGLSEEEQKRRTKPTDYIRSPTMAGGLL 313

  Fly   293 MMSREWFLKLGSFNPYLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQ 357
            ..:||:|.::|.::..:.|||||::|::.:.|:|||.||.:|||.:|||||..|.::...:::. 
 Worm   314 AANREYFFEVGGYDEEMDIWGGENLEISFRAWMCGGSIEFIPCSHVGHIFRAGHPYNMTGRNNN- 377

  Fly   358 LSPAQETYLHNSKIIAESWLDEYKNMFYALRPAARRIPLDHTYD-----ELQRMRKERRCHPFEW 417
                ::.:..|||.:||.|:|:||.::|..|...|      |.|     ....:||...|.||:|
 Worm   378 ----KDVHGTNSKRLAEVWMDDYKRLYYMHREDLR------TKDVGDLTARHELRKRLNCKPFKW 432

  Fly   418 YLRHVSPELRMHFDELSA--------------TGTLRNEDR------CVHARQKDSQPILASCYL 462
            :|.:::....:..:::.|              |.||:.:::      ..|.:.|.|.|.|.|   
 Worm   433 FLDNIAKGKFIMDEDVVAYGALHTVVSGTRMCTDTLQRDEKMSQLLGVFHCQGKGSSPQLMS--- 494

  Fly   463 SDITQWSMLRQSGQLSTHRELCLAVGFGMRIALEPCGRNETVRRSQRWVRLGTHLLHAESHLCLD 527
                    |.:.|.|  .||...|......|.::.|.:.  .:.::||......:.:.:|..|:.
 Worm   495 --------LSKEGNL--RRENTCASEENGNIRMKTCSKK--AQFNERWAYENKMIRNLKSGKCMS 547

  Fly   528 NP-LK--DRLEMSTCRSHAVSQSFQF 550
            .. ||  |...:..|......|.:.|
 Worm   548 TANLKPGDNAIVVECDEKDEHQKWNF 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 122/319 (38%)
Ricin_B_lectin 435..548 CDD:279046 27/135 (20%)
gly-9NP_001022876.1 pp-GalNAc-T 137..438 CDD:133004 122/320 (38%)
Ricin_B_lectin 450..571 CDD:279046 27/135 (20%)
RICIN 458..573 CDD:238092 26/129 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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