DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and gly-3

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_498722.1 Gene:gly-3 / 176112 WormBaseID:WBGene00001628 Length:612 Species:Caenorhabditis elegans


Alignment Length:556 Identity:177/556 - (31%)
Similarity:290/556 - (52%) Gaps:70/556 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DASSANELLSFMNES-----------------EESDHLDWRVFISHTPETSEDFYQYNIHLSNAL 83
            |..:||:|...|...                 |:...:..:.|:.:         |:|:..|..:
 Worm    88 DKETANQLRKLMETQAFGPGYHGQGGTGVTVPEDKKTIKEKRFLEN---------QFNVVASEMI 143

  Fly    84 GLIRKLPVTRHHSCTTRNSILPAPLEANVSVVISFHNEARSMLLRTIVSLLSRSPEDYLHELILV 148
            .:.|.||..|..:|.|..:.|........|::|.|||||.:.||||:.|:::|||...|.|:|||
 Worm   144 SVNRTLPDYRSDACRTSGNNLKTAGMPKTSIIIVFHNEAWTTLLRTLHSVINRSPRHLLEEIILV 208

  Fly   149 DDGSQRD--VTLLDDLKRWMGGVFGSRYRLGLTFLRNQERMGLIWSRNRGASLASGRYVLFLDSH 211
            ||.|.||  |..||.        :...:.:.:..:..:.|.|||.:|..|:.:|.|:.:||||:|
 Worm   209 DDKSDRDYLVKPLDS--------YIKMFPIPIHLVHLENRSGLIRARLTGSEMAKGKILLFLDAH 265

  Fly   212 CEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTTLSYRKGNELLKGGFDWSLHFHWL---KRQLT 273
            .||.:||||||:.|:|.:....|:|::|.|...|..|...:|...|||:|.|:|.|.   ||:|.
 Worm   266 VEVTDGWLEPLVSRVAEDRKRVVAPIIDVISDDTFEYVTASETTWGGFNWHLNFRWYAVPKRELN 330

  Fly   274 NQES-LEMPYQSPAFAGGVLMMSREWFLKLGSFNPYLKIWGGESIELAIKLWLCGGQIEIVPCSR 337
            .:.| ..||.|:|..|||:..:.:::|..:||::..:::||||::|::.::|:|||.:||.||||
 Worm   331 RRGSDRSMPIQTPTIAGGLFAIDKQFFYDIGSYDEGMQVWGGENLEISFRVWMCGGSLEIHPCSR 395

  Fly   338 IGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSKIIAESWLDEYKNMFYALRPAARRIPLDHTYDE 402
            :||:||::..:.||..:.:.:.       ||:...||.|:||||..||.:.||||.:..... .|
 Worm   396 VGHVFRKQTPYTFPGGTAKVIH-------HNAARTAEVWMDEYKAFFYKMVPAARNVEAGDV-SE 452

  Fly   403 LQRMRKERRCHPFEWYLRHVSPELRMHFDELSATGTLRNE--DRCVHAR-QKDSQ-PILASCYLS 463
            .:::|:..:|..|:|||.::.||..:..| ..:.|.:.|.  ::||... :||.| |.:.:|:.:
 Worm   453 RKKLRETLQCKSFKWYLENIYPEAPLPAD-FRSLGAIVNRFTEKCVDTNGKKDGQAPGIQACHGA 516

  Fly   464 DITQ-WSMLRQSGQLSTHRELCLAVG----FGMRIALEPCGRNETVRRSQRWV---RLGTHLLHA 520
            ...| || |...|::.:. :|||:.|    .|..:.||.|..:: :.....:|   :.|| |||.
 Worm   517 GGNQAWS-LTGKGEIRSD-DLCLSSGHVYQIGSELKLERCSVSK-INVKHVFVFDDQAGT-LLHK 577

  Fly   521 ESHLCLDNPLKDRLEMSTCRSHAVSQSFQFALEMEG 556
            ::..|:.. ...|:.:..|......|.:|    :||
 Worm   578 KTGKCVTG-ADQRVTLDECGLGRKDQMWQ----LEG 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 122/314 (39%)
Ricin_B_lectin 435..548 CDD:279046 32/124 (26%)
gly-3NP_498722.1 pp-GalNAc-T 173..473 CDD:133004 122/315 (39%)
Glyco_tranf_2_2 173..438 CDD:287123 111/279 (40%)
Ricin_B_lectin 486..604 CDD:279046 32/122 (26%)
RICIN 486..604 CDD:238092 32/122 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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