DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10000 and Galnt10

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_038941033.1 Gene:Galnt10 / 170501 RGDID:69409 Length:752 Species:Rattus norvegicus


Alignment Length:511 Identity:164/511 - (32%)
Similarity:265/511 - (51%) Gaps:69/511 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YNIHLSNALGLIRKLPVTRHHSCTTRNSILPAPLEANVSVVISFHNEARSMLLRTIVSLLSRSPE 139
            :||::|:.:.|.|.||..||.:|.::..:...|   |.|::|.||||..|.||||:.|:|:|||.
  Rat   262 FNIYVSDKISLNRSLPDIRHPNCNSKLYLETLP---NTSIIIPFHNEGWSSLLRTVHSVLNRSPP 323

  Fly   140 DYLHELILVDDGSQRDVTLLDDLKRWMGGVFGSRYRLGLTFLRNQERMGLIWSRNRGASLASGRY 204
            :.:.|::||||.|.|: .|...|:.:| .:|.|     :..||.::|.|||.:|..|||.|:|..
  Rat   324 ELVAEIVLVDDFSDRE-HLKKPLEDYM-ALFPS-----VRILRTKKREGLIRTRMLGASAATGDV 381

  Fly   205 VLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTTLSYR-KGNELLKGGFDWSLHFHWL 268
            :.|||||||.|..||.|||:|:|.|....|.|::|.||.....|. :..:.::|.|||.:::   
  Rat   382 ITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYY--- 443

  Fly   269 KR-----QLTNQESLEMPYQSPAFAGGVLMMSREWFLKLGSFNPYLKIWGGESIELAIKLWLCGG 328
            ||     :|...:..: |::||..|||:..:.|:||.:||.::|.|:|||||..|::.|:|:|||
  Rat   444 KRIPIPPELQKADPSD-PFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGG 507

  Fly   329 QIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSKIIAESWLDEYKNMFYALRPAARR 393
            ::|.:||||:|||:|:     :.|..    .||..:...|.|.:||.|:|||....|..||..|.
  Rat   508 RMEDIPCSRVGHIYRK-----YVPYK----VPAGVSLARNLKRVAEVWMDEYAEYIYQRRPEYRH 563

  Fly   394 IPLDHTYDELQRMRKERRCHPFEWYLRHVSPELRMHFDEL----SATGTLRNE------------ 442
            :.......: :::|....|..|:|::..::.:|...:..:    :|.|.:||.            
  Rat   564 LSAGDVVAQ-KKLRGSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCTDTKHGT 627

  Fly   443 -------DRCVHARQK---DSQPILASCYLSDITQWSMLRQSGQLSTHRELCL-AVGFGMRIALE 496
                   :.|:..|.:   :|..:....:..||       :.|.....::.|. ||.....:.|.
  Rat   628 LGSPLRLETCIRGRGEAAWNSMQVFTFTWREDI-------RPGDPQHTKKFCFDAVSHTSPVTLY 685

  Fly   497 PCGRNETVRRSQRW-VRLGTHLLHAESHLCLDNPLKD-RLEMSTCRSHAVSQSFQF 550
            .|   .:::.:|.| .|....|.|..|..|:|....| |:.|:||...:::|.:.|
  Rat   686 DC---HSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWLF 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 121/314 (39%)
Ricin_B_lectin 435..548 CDD:279046 29/137 (21%)
Galnt10XP_038941033.1 pp-GalNAc-T 297..592 CDD:133004 121/315 (38%)
Ricin_B_lectin 608..736 CDD:395527 29/137 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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