DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10000 and POC1B-GALNT4

DIOPT Version :9

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001186710.1 Gene:POC1B-GALNT4 / 100528030 HGNCID:42957 Length:575 Species:Homo sapiens


Alignment Length:506 Identity:170/506 - (33%)
Similarity:262/506 - (51%) Gaps:57/506 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 YQYNIHLSNALGLIRKLPVTRHHSCTTRN---SILPAPLEANVSVVISFHNEARSMLLRTIVSLL 134
            |..||:||:.:.|.|.:...|.:.|.::.   ..||     ..||:|:|:|||.|.|||||.|:|
Human    97 YAINIYLSDRISLHRHIEDKRMYECKSQKFNYRTLP-----TTSVIIAFYNEAWSTLLRTIHSVL 156

  Fly   135 SRSPEDYLHELILVDDGSQRDVTLLDDLKRWMGGVFGSRYRLGLTFLRNQERMGLIWSRNRGASL 199
            ..||...|.|:|||||.|.| |.|...|:.::..:  .|.||    :|..:|.||:.:|..||:.
Human   157 ETSPAVLLKEIILVDDLSDR-VYLKTQLETYISNL--DRVRL----IRTNKREGLVRARLIGATF 214

  Fly   200 ASGRYVLFLDSHCEVNEGWLEPLLERLALNTNLAVSPLLDPIDPTTLS-YRKGNELLKGGFDWSL 263
            |:|..:.|||.|||.|.|||||||||:..:....|.|::|.||..|.. |.:..|.:.|||||.|
Human   215 ATGDVLTFLDCHCECNSGWLEPLLERIGRDETAVVCPVIDTIDWNTFEFYMQIGEPMIGGFDWRL 279

  Fly   264 HFHW---LKRQLTNQESLEMPYQSPAFAGGVLMMSREWFLKLGSFNPYLKIWGGESIELAIKLWL 325
            .|.|   .|::...:.|...|.:||..|||:..:|:::|..||:::..:::||||::||:.::|.
Human   280 TFQWHSVPKQERDRRISRIDPIRSPTMAGGLFAVSKKYFQYLGTYDTGMEVWGGENLELSFRVWQ 344

  Fly   326 CGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQETYLHNSKIIAESWLDEYKNMFYALRPA 390
            |||::||.|||.:||:|.:|..:            |:..:|.|:...||.|:||||..||...|.
Human   345 CGGKLEIHPCSHVGHVFPKRAPY------------ARPNFLQNTARAAEVWMDEYKEHFYNRNPP 397

  Fly   391 ARRIPLDHTYDELQR---MRKERRCHPFEWYLRHVSPELRMHFDELSATGTLRN---EDRCVHAR 449
            ||:    ..|.::..   :|:..||..|:|||::|.|.|.:..|.....|.:|:   ...|:...
Human   398 ARK----EAYGDISERKLLRERLRCKSFDWYLKNVFPNLHVPEDRPGWHGAIRSRGISSECLDYN 458

  Fly   450 QKDSQPI-----LASCYLSDITQWSMLRQSGQL--STHRELCLAVGFGMR-IALEPCGRNE-TVR 505
            ..|:.|.     |..|:.....|:.....:.::  ::..|||..|..... :.::.|.::. .|.
Human   459 SPDNNPTGANLSLFGCHGQGGNQFFEYTSNKEIRFNSVTELCAEVPEQKNYVGMQNCPKDGFPVP 523

  Fly   506 RSQRW--VRLGTHLLHAESHLCLD---NPL-KDRLEMSTCRSHAVSQSFQF 550
            .:..|  ...|| :.|..|.|||.   .|. :..::|.||.:...:|.:.|
Human   524 ANIIWHFKEDGT-IFHPHSGLCLSAYRTPEGRPDVQMRTCDALDKNQIWSF 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 127/315 (40%)
Ricin_B_lectin 435..548 CDD:279046 27/130 (21%)
POC1B-GALNT4NP_001186710.1 WcaA 131..427 CDD:223539 129/323 (40%)
pp-GalNAc-T 135..429 CDD:133004 127/316 (40%)
RICIN 443..573 CDD:238092 27/130 (21%)
Ricin_B_lectin 443..571 CDD:279046 27/128 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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