DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10000 and galnt12

DIOPT Version :10

Sequence 1:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_002935181.2 Gene:galnt12 / 100485011 XenbaseID:XB-GENE-986239 Length:597 Species:Xenopus tropicalis


Alignment Length:170 Identity:30/170 - (17%)
Similarity:56/170 - (32%) Gaps:65/170 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 IVSVARGCLNRST---IKTAQYGTAILAFNKNMWEQRINFSASAINLHPYEDIALARLNYPATLN 141
            ::.:.||.|::..   :|...:.|:.:.          .....|:|.:| ::|.:..|       
 Frog   194 LLELGRGVLDQQVPPLVKVTHHVTSSVT----------TLRCRALNYYP-QNITMKWL------- 240

  Fly   142 KHVQPIRLPKLSDSRSYVDMEGT-----TVAT-----NRYVRNRVMSNAECTKEHPNFNATHVDI 196
            |..||:...:........:.:||     |:|.     .||.         |..|||.        
 Frog   241 KDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYT---------CQVEHPG-------- 288

  Fly   197 CTDRYKGGAFCSFFLGSPLTI---EDENGVILIGLANWIS 233
                          |..||.:   ...:|.::||:.:.|:
 Frog   289 --------------LDQPLIVIWEPSPSGTLVIGVISGIA 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 25/134 (19%)
beta-trefoil_Ricin-like 432..550 CDD:483949
galnt12XP_002935181.2 pp-GalNAc-T 153..447 CDD:133004 30/170 (18%)
beta-trefoil_Ricin_GALNT12 457..596 CDD:467349
Blue background indicates that the domain is not in the aligned region.

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